Gene Ddes_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0924 
Symbol 
ID7284601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1079559 
End bp1080110 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content60% 
IMG OID643581721 
ProductCRISPR-associated protein, Cse2 family 
Protein accessionYP_002479509 
Protein GI220904197 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAC TGGTGCAATG GCTGCGGACA CAAAAGGAGC GTCGCGGGGT TCTGGCCCAG 
CTGCGCTGCG GTATTGTGCC CGGCAAACAG CAAAGAGCAT GGCCGCTACT GGCTCCCTTT 
GACGGTATTG AGGGATATAA GGGTGAGGTT GTTCGCACTG TTGCCGCCCT GTATGCCGCA 
CATCCTGAGG AATCCGCTTC CGGCAGTATG GGCAGCGTGT GCCGAAAACT GTGTTCGGAT 
GACGAGCGGC GCGATGATGA AAAGCCCGGT GCCATTGGTA TGCGTTTTCA GCATTTGCTT 
GCCGCCGAAA CTGCGGAGGT ATGCCCGCGT GTGGTGCGCC TGATTTTGCG TGCCAGGGCG 
CAGGGCATAC CCGTAAACTA TGTGCAGTTG CAAGAAGACC TGCTGCAATG GGCGGTTCCG 
CACAAACGCA GGTATGTGCA GGAGCGATGG GCGCAGCAGT TCTGGGCACC GGCCGCTCAG 
CCTGCAGGAC TGGATAACAC GTCCGGGCAG CAGCCAGATA CCCCACAGGA CACTCCGGAG 
ACCATGCCAT GA
 
Protein sequence
MTALVQWLRT QKERRGVLAQ LRCGIVPGKQ QRAWPLLAPF DGIEGYKGEV VRTVAALYAA 
HPEESASGSM GSVCRKLCSD DERRDDEKPG AIGMRFQHLL AAETAEVCPR VVRLILRARA 
QGIPVNYVQL QEDLLQWAVP HKRRYVQERW AQQFWAPAAQ PAGLDNTSGQ QPDTPQDTPE 
TMP