Gene Ddes_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0832 
Symbol 
ID7284507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp976950 
End bp977627 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID643581629 
Productheat resistant agglutinin 1 
Protein accessionYP_002479418 
Protein GI220904106 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000970612 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTT TTATAGTCGC TATGGCGCTT GCCCTTTCGC TTGCCCTTCC CGGGCTGGCC 
GCTGCCGAAG GCACCGGCAT GTACCTGGCC CCCAAATTCC TTATGAGCAT CCAGAGCACC
GGACAGATGG AACGTTCCAG TGGTCTGGCC GGTAGCGGGG TCGACAACTA CAACCAGTTC
ACCCTTGGCG GCGCTATGGC CCTGGGCTAT GACTTCTGGC CCCAGCAGAT GCTGCCCCTG
CGCGCTGAAA TCGAATTCGC CCTGCGCGGC AACAGCGAAA AAAGCTGGAG CGACGGCGGC
TCGAACCTGC GTGATGTCAA GGGCGTCTGG AACAACTCCA CCCTGTTCGC CAACCTGTTC
TGGGACTTCC GCAACGATAG CGCCCTTACC CCTTATGTGG GCGGTGGTAT CGGCCTGGCT
TTCAACTACA CCGGCTACAC CTTCAAGGAC AACAACGGCA ACAAGTTTGA AGCTGACGAC
CGCTTCACCA ACTTTGCCTG GAACCTGGGC GCCGGTGTGT CTTACGACAT CAACGAAAGC
TTCACCCTTG ACGCTTCGTA CCGCTTCGTG GGCCTCGGCT ATAACGAAGT CAGCTCCACC
GTGAACGGCA TCAAGTACGA AGTGGGCAAC CGTCCCTACA ACAATGAATT TATGATCGGC
CTGCGTTACG GCTTCTAG
 
Protein sequence
MKRFIVAMAL ALSLALPGLA AAEGTGMYLA PKFLMSIQST GQMERSSGLA GSGVDNYNQF 
TLGGAMALGY DFWPQQMLPL RAEIEFALRG NSEKSWSDGG SNLRDVKGVW NNSTLFANLF
WDFRNDSALT PYVGGGIGLA FNYTGYTFKD NNGNKFEADD RFTNFAWNLG AGVSYDINES
FTLDASYRFV GLGYNEVSST VNGIKYEVGN RPYNNEFMIG LRYGF