Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0824 |
Symbol | |
ID | 7284499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 965189 |
End bp | 966397 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643581621 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_002479410 |
Protein GI | 220904098 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.325184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA TCTCCATTCA AAACATTTCT AAAGTCTTCG GGCCACAGCC GGACCAGGCG CTTGAACTGG CAGCCGAAGG CGCCTCACGC GCGGACATTC TGCGAAAAAC CCGCACCACA GTGGCCCTGC GCGACATATC CCTTGATATT ACAGACAGCG AACTGCTCGT CATTATGGGT CTTTCCGGCA GCGGCAAATC AACCTTGCTG CGCTGCCTCA ACGGACTGAT CATGCCCAGC ACCGGGCGCA TCCTTGTGGA CGATGCGGAT ATAACCACAA TGAATGCCAA AGGGCTGCGC CATGTGCGCC AACGCTGCTT CGGCATGGTG TTTCAGAATT TTGCGCTTTT TCCTCATCGC ACGGTATTGC AGAATACAGC CTTCGGCCTT GAGGTCATGG GCGTATCTGA AACCCAGCGC CTGAAAAAAA GCGAAGAAAT GCTTGAGCGC GTCGGCCTTG CACAGTGGAA GAACTCCTAC CCCGGCGAGC TTTCCGGGGG CATGAAGCAG CGTGTGGGCC TGGCCCGTGC CCTGGCTCTT GAGCCGGAGG TGCTGCTTAT GGACGAAGCC TTCAGCGCCC TTGACCCCCT TATCCGGCAG GAAATGCAGG ACGAGTTGCT GTCGCTTCAG GAAGACATTC AAAAGACCAT TGTTTTCATC ACTCATGACC TTAACGAGGC CTTCAAGCTC GGCGACCGCA TTGTCCTGCT GCAGGACGGA GCCGTTGTGC AGACAGGTAC CCCCGAAGAA ATCCTTCAGG CCCCGGCCAA CGACTATGTG GCCCGTTTTG TCGCCTCGGC CGACGCCTCG CAGGTACTGA CCGCAGCCAG CGTCATGAAG CGCTCCGAAG ATACCGCGGT GCTTGGTCTG GATGGCCCGC GCGCTGCCTT GCGCAAAATG CGCGTACACT CCATTGCTTC GCTTTTTGTG CTGGACCGAC ACCGCCGTTT TGTGGGCATC CTTAACGCCG ATGACGCCGA AGCCATGATC AGCGAGGGCC GTTCGGACCT TACTGAAATA ACCCGCACAG ACATCGTGAC CGTCACACCT GACACCCCCG TTACCGAACT TGTGCCGCTC ATGGCCGAAC TGCCCTACCC GTTGGCTGTG GTAGATAACC GCCAGCGTTT ACAGGGTGTT ATCGTGCGTG GACTGTTACT GGGCGCTCTG GTGGAACATA ACGACAGGAG AGGCGCGCAT GCTGCCTAG
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Protein sequence | MAKISIQNIS KVFGPQPDQA LELAAEGASR ADILRKTRTT VALRDISLDI TDSELLVIMG LSGSGKSTLL RCLNGLIMPS TGRILVDDAD ITTMNAKGLR HVRQRCFGMV FQNFALFPHR TVLQNTAFGL EVMGVSETQR LKKSEEMLER VGLAQWKNSY PGELSGGMKQ RVGLARALAL EPEVLLMDEA FSALDPLIRQ EMQDELLSLQ EDIQKTIVFI THDLNEAFKL GDRIVLLQDG AVVQTGTPEE ILQAPANDYV ARFVASADAS QVLTAASVMK RSEDTAVLGL DGPRAALRKM RVHSIASLFV LDRHRRFVGI LNADDAEAMI SEGRSDLTEI TRTDIVTVTP DTPVTELVPL MAELPYPLAV VDNRQRLQGV IVRGLLLGAL VEHNDRRGAH AA
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