Gene Ddes_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0820 
Symbol 
ID7284495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp959406 
End bp960422 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content58% 
IMG OID643581617 
Producthypothetical protein 
Protein accessionYP_002479406 
Protein GI220904094 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACTC CCACTCCTCG CCGCGACCTC GTGGTCCGGG GCATACTTTA CATGCTGGCC 
ATGGCTATTC CCACCAGTGT CAGCCTGATC TGCAACGAGC CGGAAGTGCT TGTGCTGGGT 
GCTCTGGGGG CCTTGTTCGC CCTCTTTATC GCTCCCCGCT ACAAACCGTT GCCGCGCACG 
CTCTGCATCG GCGCCGGGGG GCTGCTCGTT TGCATGGCCG GCGCGGTGGG TGTGTTTACC 
CAGGGCAACA ACAATCTTGC CCTTATACCG CTGGTCATGT TCAGTTGGCT GGCCGCCCTG 
CCCCGGCCTG ATCAGGCCTA CCTCAGCCTT GTTTTTAAAA ATATGGGAAC AGCAGCCCTG 
CTGACCCATT TCGGCATGAC CAGTTCCATC AGTGCAGCCG CCATCTACAT GACCGGTCTT 
GCCCTGGGGG CAACCCTGAG CGTGCTGGGC ATACGGTTCG GCAGCGGACA GGGCAGCGGC 
GCAAGCCCTT TTGAAGAATT CAAGGCGTTC AAGCACGGGG CTGTCAACAA TCCGCTGTTC 
GGCATGGCCG TTCCCGCTAC GGTACTTTTG TGTACCCTGG CCGCAGGCGG CCTGCACTTC 
AGCCATCCGG CCTGGGTGGG GCTGACTGTT CTCTTTGTCA TGCACAGTGA CGGCGCCACC 
GAACTACGCC GCATACGCGA CCGCGCCCTG GGAACAGTGG TCGGTGTCAT TGCTGCCGCC 
CCCCTTGTAT TCTACATATC ATCCCCCCTT CCACTTGCTG CCTGCGTGTT CTGCGCCGCC 
CTTTTCATCC CTTACGCACA ACGCGGGCAC TATATGCTCT TCAGTTTTAT CATTACTCTT 
ATCGTGCTGC TGCTGATCGA TATGGCCACA TTGCGCATGG GGGGTGATAT TTCACTGCTG 
CGGTGGCGGC TGCTTGATAC CATCCTGGCC TGTGGAGGAG TGCTTATTTC CAACCTCATA 
TTAAGACTTA TAGCTTCCCG GCTTAACAGA AATAAAAAAC TTGAAAACAC CGTATAA
 
Protein sequence
MPTPTPRRDL VVRGILYMLA MAIPTSVSLI CNEPEVLVLG ALGALFALFI APRYKPLPRT 
LCIGAGGLLV CMAGAVGVFT QGNNNLALIP LVMFSWLAAL PRPDQAYLSL VFKNMGTAAL 
LTHFGMTSSI SAAAIYMTGL ALGATLSVLG IRFGSGQGSG ASPFEEFKAF KHGAVNNPLF 
GMAVPATVLL CTLAAGGLHF SHPAWVGLTV LFVMHSDGAT ELRRIRDRAL GTVVGVIAAA 
PLVFYISSPL PLAACVFCAA LFIPYAQRGH YMLFSFIITL IVLLLIDMAT LRMGGDISLL 
RWRLLDTILA CGGVLISNLI LRLIASRLNR NKKLENTV