Gene Ddes_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0789 
Symbol 
ID7284463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp923620 
End bp925068 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content60% 
IMG OID643581585 
Productglycine dehydrogenase subunit 2 
Protein accessionYP_002479375 
Protein GI220904063 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACCA TCTTCGCCAA ATCCGTTCCC GGGCGCGGCG CGTTCTGCAT AGAGTCCGAC 
GCCCCCAAGG CTGCGGACAT GCTGCCCGCC GGCCTGCTGC GCAAGGAAGA ACCGGGGCTG
CCCCAATGCT CCGAGCTGGA TGTGGTACGC CACTTTACCG GCCTTTCAAA ACTCAACTAC
AGTGTGGATG CCAATTTTTA TCCGCTTGGC TCCTGCACAA TGAAGTACAA CCCCAAGTTT
ACTGAATACG TGGCCGCGCT GCCGGGGTTC GCGCGCCTGC ACCCCATGCT TGCCCAACTG
GGCGGCGCGG CGGGCTGCAC CCAGGGCGCG TTACAGTGCA TGTATGAAGC AGAAAACATG
CTTTGCGAAC TGACAGGCAT GAAAGCCTTC ACCCTGCAGC CCATGGCCGG GGCCAATGGC
GAGTTTGTGG GCGTCAAGCT TATTGCCGCC TACCACAAGG CCAAGGGGCG TGACCGCAAG
AAGATGCTCA TCCCCGATGC TGCCCACGGC ACCAACCCTG CCTCTGCCGC GCTGGCCGGA
TTCGAGACAA TCAACCTTGA ATCCCGCCAC GGCATGGTAG ACCCGGAAGC CATTATAGAA
GCTATCCGCA AGCACGGAGA GGACGTGGCA GGGCTTATGA TGACCTGCCC CAATACTCTG
GGCCTTATGG AAGTGCATCT GCCCCGCATT GTGGCCGAGC TGCGCAAGAT AGATGCGCTG
CTCTACTACG ACGGAGCCAA TATGAATGCC ATCATGGGCA AGATGCGCGT GGGCGATGTG
GGCTTTGACG TGGTGCACCT CAATGTGCAT AAAACCCTGT CCACCCCGCA CGGTGGCGGT
GGCCCCGGAG CGGGTCCCGT CGGCGTGAGC GAGTGCCTGC TGCCTTTCCT GCCCGCGCCC
CGTGTGCGCA AGCGTGAGGA CGGCTCCTAC TTCCTCGACT ACGATGTGCC GCAGTCCATA
GGCTATATGG GGCCGTTTTA TGGCAGCTTC GGCGTGATGG TCAAAGCGCT CGCCTACATG
TTGCGCCTGG GAGGGGAGGG CCTTACCCGG GCTTCGGAAT ACGCGGTGCT CAACGCCAAC
TATCTGAAAA AGAAGCTTGA AAACACGCTG GATATTCCCT ATGCCGACAG GCTGTGCGCC
CACGAGTTCG TGGCCTCGGC CCCGCAGGAA ACCCGTGCTC TGGATATTGC CAAGGCTCTG
CTGGACCGCG GCTTCCATGC GCCGACCATC TACTTCCCGC TTATTGTGCA TGAATGCATC
ATGGCCGAGC CGACGGAAAC AGAAAGCAAG GAAACCCTGG ATTCCTTTGT GCAGGCTCTT
GAAGAGATCA TGCTCCAGGC CAAGAGCGAC CCGCAGGCCC TGCTGGATGC TCCCGTAACC
CTGCCCGCGC GCCGTATGGA CGAGACCGGG GCCGCTCGCA ACATGATCCT TACGGAAGAT
ATGGCCTAA
 
Protein sequence
MKTIFAKSVP GRGAFCIESD APKAADMLPA GLLRKEEPGL PQCSELDVVR HFTGLSKLNY 
SVDANFYPLG SCTMKYNPKF TEYVAALPGF ARLHPMLAQL GGAAGCTQGA LQCMYEAENM
LCELTGMKAF TLQPMAGANG EFVGVKLIAA YHKAKGRDRK KMLIPDAAHG TNPASAALAG
FETINLESRH GMVDPEAIIE AIRKHGEDVA GLMMTCPNTL GLMEVHLPRI VAELRKIDAL
LYYDGANMNA IMGKMRVGDV GFDVVHLNVH KTLSTPHGGG GPGAGPVGVS ECLLPFLPAP
RVRKREDGSY FLDYDVPQSI GYMGPFYGSF GVMVKALAYM LRLGGEGLTR ASEYAVLNAN
YLKKKLENTL DIPYADRLCA HEFVASAPQE TRALDIAKAL LDRGFHAPTI YFPLIVHECI
MAEPTETESK ETLDSFVQAL EEIMLQAKSD PQALLDAPVT LPARRMDETG AARNMILTED
MA