Gene Ddes_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0780 
Symbol 
ID7284454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp914146 
End bp914967 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content61% 
IMG OID643581576 
Producthydrolase, TatD family 
Protein accessionYP_002479366 
Protein GI220904054 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAA AATCCACCAA CCGCATTGAT CCCGTTTCTG TTCCCCTGCC GCCGGAAGGT 
GTCGACAGCC ACGCCCATCT GGACGGCGAG GAGTTTGACC TGGACCGTGA AGCCGTACTG
GAAAGGGCCG CTGCCTGCGG CGTAAGCCAT GTGGGCAATG TCTTTCTCAA TCCCGGCCAT
CTCGCCGCCC GGCGGCACTA TTTTGCGGAT CACCCGCAGG TTTTCTTTCT GCTTGGCGTG
CACCCCTGCC ATGGGCGGGA CTGCACGCCC CAGGTTATCG AAGCCATGCG CCAGGCCTTT
GCAGAAGAGC CGCGCCTCAA GGCCGTGGGT GAAATCGGCC TGGATTTTTA TTGGGACGAT
TGCCCCCGCG AAGTACAGTA CGAGGTTTTT ACCGCGCAGC TCAGGCTGGC CCGTGAGCTG
GAGCGTCCTG TGGTGATTCA CTGCCGTGAG GCTGAAAAAG AAACGCTCAT GGTTCTGGAG
TCGCAGGGTT TCGCCGGTTA TCCGCTACTG TGGCACTGTT TTGGCAAAGG ACCGGACCTG
GCCCGGCGCA TCGTGCGCAA CGGCTGGCAT GTATCTGTAC CCGGCCCCGT GACCTACAAG
GCAAATGAAG AGCTGCGCGA AGCCGTAGCC TGCATTCCCT CCGACCGGCT CATGCTGGAA
ACCGACGCTC CGTATCTAGC TCCTGTACCC TGGCGCGGCA AGCGCAACGA GCCTGCCTTT
ACAGTGTTTA CGGCGCGGGC GGTGGCGGAA GCGCGCGGGC AGGATGCGGA AGAACTGTGG
CGGCAGTGCG GTGCCAATGC CCGGCGGTTT TTCGGCCTGT AG
 
Protein sequence
MSKKSTNRID PVSVPLPPEG VDSHAHLDGE EFDLDREAVL ERAAACGVSH VGNVFLNPGH 
LAARRHYFAD HPQVFFLLGV HPCHGRDCTP QVIEAMRQAF AEEPRLKAVG EIGLDFYWDD
CPREVQYEVF TAQLRLAREL ERPVVIHCRE AEKETLMVLE SQGFAGYPLL WHCFGKGPDL
ARRIVRNGWH VSVPGPVTYK ANEELREAVA CIPSDRLMLE TDAPYLAPVP WRGKRNEPAF
TVFTARAVAE ARGQDAEELW RQCGANARRF FGL