Gene Ddes_0586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0586 
Symbol 
ID7284258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp710781 
End bp712160 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content61% 
IMG OID643581381 
ProductO-antigen polymerase 
Protein accessionYP_002479173 
Protein GI220903861 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000335873 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAAACC TGCTGGAATA TGGCAAAGGC CAGATAACCG GTCTGCATGC CGCCATAGCG 
GCTTTTCGGC AGATGCCGCC CGCCGAGCGC TGGTTCTCCT GTCTTTTCTG GTCGTTCTGG
GTCTCACTGG TCACATTTCC TTCGGGCTAT GCCATTCGCG ATATCATGCC GGTGGTCTGC
CTGATCTTTC TCACCCTGTA TTACCGCTGC AACTGGCGTC ACAGCGTATT GCGCAGGCTG
GGGGCATGGC CGCTCTTCGC CTGCCTCGGG CTCATGGTCT TTATAGGCGT GGCCTTTTCG
CAAAGCCCCG GCGCATCCCT GCTGCATGCC GGGTCTGGCC TCAACAAGGG GTTCATTCTG
CCGTTCATCG CCATGGAGTG CGTCCGTGGA GAAAAAGATC TGCGCCGCCT GGTATGGGCC
AGCGTGCTGG CCGTTTTCTG GCAGGGACTT GATGGTGTGT GGCAGGCGCA GACAGGCAGG
GATTTCCTCA TGGGCTACCC GCTCCACAGC GGGCGGCTGA CAGGCAGTTT TGACGACTAC
GAAGTAGGCA ACTACATTGC CCTCGCCCTC ATACCGGCAT TCGGCCTTTG GTTCATCCTG
CGGCAGTTTT TTTCACGGTT GCCGTCACTG CTGTTGAGCA CAGCCGTTCT CTGGCCAGCT
TTTTTCCTGC TGGCCGGCGC CGGCAGCCGC AGCGGAGCGC TGGCCATCGC CGCCGCCATG
GGGCTGTGGC TGCTCCTGAC GGGCAGCTCT TCGGTCCGCT GGAAAGGCCC GCTTTTTGCC
GCAGCCGCCC TGCTTCTGAT TCTTGTGGCT CAAGGCCGCG CCCGCCTGGA CGCTGTGGTG
GAAGACGGCC GCTGGAGCCT GTGGAAGCTC GGCTGGCGCG TTTTTCTGGA GCACCCCTGG
TTCGGCGCCG GAGCCGGGCA GTATAATGCC GCTTTTCGCA GCTTGGGCCT CAGCCCGGAA
AAAGACGCCA TAACCATCAG CCACCCGCAC AATATCTATC TGGACATGCT GTACGCGCAC
GGGCTTGTGG GTTTTGCCCT GGGCATGATT TTTCTGCTGG GTTTCTCCTG GTGGGGATAT
ACGCGCATCA GGCCACGCCT GCAGGCTGAG CGCACCCGCG AGAAAAAAGG TATTTACTGG
CACATGACGG CCTGTTTCTG GATGGGCTTT GTGGCCTGGC TTTTTAACGG CATTTTCGGC
CACGATTTTT ACAGGGTCTG GTGGCTGGCT CTGGCCATGT GCCACCTGGG CGTCATGATC
GGCGCGGTCG TCAACGGACC GGCAGGCCGG AAAGAGGCAG ATGATGCGAG AACCGCAGGC
AGGCCGGACG GCCTTTCCAC AGTGGCGGAA ATGGCGGGAA CAAAAACAGA CGGCGCGTAA
 
Protein sequence
MRNLLEYGKG QITGLHAAIA AFRQMPPAER WFSCLFWSFW VSLVTFPSGY AIRDIMPVVC 
LIFLTLYYRC NWRHSVLRRL GAWPLFACLG LMVFIGVAFS QSPGASLLHA GSGLNKGFIL
PFIAMECVRG EKDLRRLVWA SVLAVFWQGL DGVWQAQTGR DFLMGYPLHS GRLTGSFDDY
EVGNYIALAL IPAFGLWFIL RQFFSRLPSL LLSTAVLWPA FFLLAGAGSR SGALAIAAAM
GLWLLLTGSS SVRWKGPLFA AAALLLILVA QGRARLDAVV EDGRWSLWKL GWRVFLEHPW
FGAGAGQYNA AFRSLGLSPE KDAITISHPH NIYLDMLYAH GLVGFALGMI FLLGFSWWGY
TRIRPRLQAE RTREKKGIYW HMTACFWMGF VAWLFNGIFG HDFYRVWWLA LAMCHLGVMI
GAVVNGPAGR KEADDARTAG RPDGLSTVAE MAGTKTDGA