Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0542 |
Symbol | |
ID | 7284210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 653505 |
End bp | 654044 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643581335 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_002479131 |
Protein GI | 220903819 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTAG CGGCAACGCC TCTGGCCGGA GTCATGCTTA TAAAGCCCAG GGTATGGGGT GACAGGCGGG GCTATTTTGT CGAGACCTGG CAGCATGAAC GGTACGCGGC TGCGGGCATT GACGCGGCTT TTGTGCAGGA TAACCATTCC ATGTCGACGT ATGGCATATT GCGCGGCCTA CATTTCCAGA AAACCCGTCC CCAGGGCAAG CTTGTGAGCG TTTCCCTGGG CAGGGTATTT GATGTGGCCG TGGATATCCG GCCCGGGTCG CCCACCTTCG GCCAGTGGTA TGGCGTGGAG CTGACGCAGG ACAATCAGTG GCAGCTCTGG GTTCCGCCGG GCATGGCGCA CGGCTTTGCC GTGACCAGCC AGGTGGCGCA CTTTCATTAC AAGTGCACAG ACTATTACTG CCCCGAAGAC GAAGGGGGCA TACGCTGGAA CGATCCGGAC CTTGCTGTGG CCTGGCCCGT GGCGCAGCCT CTTTTGTCGG ACAAGGACCG GCACACGCCT TCGTGGCGGG AATTTCTGGC AGGACTGTAA
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Protein sequence | MEVAATPLAG VMLIKPRVWG DRRGYFVETW QHERYAAAGI DAAFVQDNHS MSTYGILRGL HFQKTRPQGK LVSVSLGRVF DVAVDIRPGS PTFGQWYGVE LTQDNQWQLW VPPGMAHGFA VTSQVAHFHY KCTDYYCPED EGGIRWNDPD LAVAWPVAQP LLSDKDRHTP SWREFLAGL
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