| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0510 |
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| Symbol | |
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| ID | 7284177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 616990 |
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| End bp | 619287 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643581302 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002479099 |
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| Protein GI | 220903787 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.226401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAGT CGTCCAAAAC CTTCATAGCT ATCGTTGTTC TCGCGATGTT ATTCACCGCG
CTGCTCATAG TGGTGCGCGA ATACACCGTG GAAACAACAC GCCATCTGTC ACAGGACATC
ACTACCCGGC TTGCCGAAGT GAGCCTGCGT GTGGCCGACG ACTTTGAACA CAGCATTGAC
AACAAACTGA CTGAATTGCA AGGCATTACC GGTTTTCTGG CTAAAGAGGA CTGCCTGCCC
CGCAAAGACT GTGTGCTGCA TTATGCCCCG CTGCTGCGTG CCGCCGGCCT GAAAAGGTTT
GCCATCATCA GCCCGGACGG CCAGGGCTTT TGCTCCATGA CGGGGCTACC CATTGATATT
GAACAGAACA GCAAAAAAAG CCTGTTCGAA CGTGCCCTGG CCGGAACAGC CAATATTGCC
GCCGTGCCTG ACGGCAAGGG CAGCAAGCTT GCCGTAGCGC TGCCCATACA GCGAAACAAG
GAAATTGTGG CTGTTCTCAT CGGCGAACTT GAAGACGAGC CGATGAAAAA AAGCCTGTTT
ACCAGGGCAT TTGGCGATAA AACCTGTAAC ATGGTTTTCG ACGGCAACGG GCGCCTGCTG
TTCTCGGCCG CGCCGCCGGG CAGTCTGGAC AGGCTGTTTC CGCAAATGGC GGAAAAAGGG
CTGCCCACCT CACTGCGTGA ACACCTGCTG ACCATTTTTT CCGATATCAC GCCCGGACCG
GACTGTCAGC GGAAAACAGA CTGCCTGATA AAAGACGACC ACCATTCCTA CTACGTGACG
CACGTGCCGC TACAGCAATA TGGCTGGCAG GTGGTTTCGC TGCTGCCGGA AGAAGTGGTG
AAGCATCTGG TGGACAGGCA GAACGACATT ACCACCACGC TGGCCTGGCG GCTGTCCATC
CTGGCCGGGC TGCTGCTGGT TCTCATCATC GGCGTCATGC AAAGCTACCA CCGCACCATC
CACCGCCAGC AGGAAGACTA CCGCTCCATC ATTGCAAGCA TATCCGGCGG TGTCATCAAA
TTCGGCGGGC TGCACGGCAC ATTCCAGTTT ATCAGCCCCA ATTTTCTCAA GATGCTGGGG
TACCGCAAAG ACGAGTTCGA GCAACGCTTC GGCAAGGATT TTGCCCTGTC CATTTTTGAG
CCTGACCGGG AAAACGCCCT CCGCACCATG CAGCAGCAAC TGGAAGCTGG CATTCCCATT
GATGTGGAAT ACCGCACCAG CGCCAAAAAC GGCGCTCTTA TCTGGCTGTA CCACAAGGGG
TCTCCGGTGC AGGCCGGACC AGGGCAAACG TATATCCAGA GCATCGTTTT TGACATTACC
CAAAATAAAG AGGCCGCACA GGCCAAACGG ATTTCCGACG AGCGCTACCA GTTCATTCTG
GAGCAGCATG ATATTATTAT CTTTGAGCAG AATCTTATTA CCGGCAACTT CTCCTGTTCT
GCAAAATGGA TGCAGACCTT CGGTCACGTG TTCAACATTC TTGAGCCGAA TCCGGAACAG
GGGCGCATTC CCGTGCATGC AGAAGACCAC GAACTGCTTG AAGATTTTCA AAAGCGCGTA
CATCAGGACA TGCACGAACA TAAAAAACAG GTTGAACTGC GCCTGCGCGA TGCCAGCGGC
CTGTACCACT GGTACCGCAT TGAGGCCTCA AGCCTCATCA GCGCCCAGGG CAAGCCCATA
TATTTTATCG GCATCATTAC CGATATAGAC CGGCAAAAAA CGCTGGAACT GCGCCTGCGC
ACCCAGGCCA CGCGCGACAG CGCCACAGGC ATGTACAACA AACGCGCCAC AGAACAGGCC
ATTTCGCGGT TTCTGAGCCT GCACAACGGC TCCAGTATCG GCATTTACGC CATGTTCATG
ATAGATTTTG ACAACTTCAA GAGCATCAAC GACAGGTTTG GCCATACCGT GGGTGACAAG
GCCATTTACC AGATGGCCCA GATCATCCGC CGTAACTTCC GCAGCAGTGA TATTGTGGGC
CGTGTGGGCG GCGATGAATT TCTTGTTTTC TGCACCGAAA CCATGCCGCT TTCCAAAATA
CACGAAAGAG CCGCAACCCT CGTCAGGCAA TTGCGGCTTC ATTGCGGACA GGGGGAAGAC
GACCAGCCCC TTACCGCCAG CGTGGGAGTG TCCTGCCACC CCACTGACGG GCATGATTTT
TCGGAACTCT ACAAACATGC CGACATGGCC ACCTATGAGG CCAAAAGACG GGGCCGCAAC
CAGTGCGTTT TTTATGCGGA ACTGACCGCC GGGGAACAAA AAAGCGCTCA CGATTCCCTT
TTTCCCGAAG AGCAATGA
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| Protein sequence | MVKSSKTFIA IVVLAMLFTA LLIVVREYTV ETTRHLSQDI TTRLAEVSLR VADDFEHSID
NKLTELQGIT GFLAKEDCLP RKDCVLHYAP LLRAAGLKRF AIISPDGQGF CSMTGLPIDI
EQNSKKSLFE RALAGTANIA AVPDGKGSKL AVALPIQRNK EIVAVLIGEL EDEPMKKSLF
TRAFGDKTCN MVFDGNGRLL FSAAPPGSLD RLFPQMAEKG LPTSLREHLL TIFSDITPGP
DCQRKTDCLI KDDHHSYYVT HVPLQQYGWQ VVSLLPEEVV KHLVDRQNDI TTTLAWRLSI
LAGLLLVLII GVMQSYHRTI HRQQEDYRSI IASISGGVIK FGGLHGTFQF ISPNFLKMLG
YRKDEFEQRF GKDFALSIFE PDRENALRTM QQQLEAGIPI DVEYRTSAKN GALIWLYHKG
SPVQAGPGQT YIQSIVFDIT QNKEAAQAKR ISDERYQFIL EQHDIIIFEQ NLITGNFSCS
AKWMQTFGHV FNILEPNPEQ GRIPVHAEDH ELLEDFQKRV HQDMHEHKKQ VELRLRDASG
LYHWYRIEAS SLISAQGKPI YFIGIITDID RQKTLELRLR TQATRDSATG MYNKRATEQA
ISRFLSLHNG SSIGIYAMFM IDFDNFKSIN DRFGHTVGDK AIYQMAQIIR RNFRSSDIVG
RVGGDEFLVF CTETMPLSKI HERAATLVRQ LRLHCGQGED DQPLTASVGV SCHPTDGHDF
SELYKHADMA TYEAKRRGRN QCVFYAELTA GEQKSAHDSL FPEEQ
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