| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0444 |
|---|
| Symbol | |
|---|
| ID | 7284109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 537093 |
|---|
| End bp | 537701 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643581235 |
|---|
| Product | Indolepyruvate ferredoxin oxidoreductase |
|---|
| Protein accession | YP_002479034 |
|---|
| Protein GI | 220903722 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGC AGAACAAGCA GAAGCGCATG CGCGTTTACT TTACCGGCGT GGGCGGCCAG
GGAACCCTTA CGGCCACGAC CTTGCTGGCC CGTACGGCCC TTGAGGCCGG GCTGGATGTG
GTGGCGGGCG AAGTGCACGG CATGGCCCAG CGCGGCGGCG TGGTGGAATC TGTCATGCTG
TTGGGCGGCT GGCGTTCGCC CAAACTGGAC CTTGGCGAGG CTGACGTCAT GCTGGGCTTT
GAACCTTTGG AAACCCTGCG TGGCCTGCCC TATCTGCGGC AGGGCGGCAC GGTGTTTTCC
AGCAGCGACG CGCTGCCGCC CGTGGGAGTG TCGCTGGGCA AGGCCGTGTA CCCTGATATG
GCGCACATAG AATCCAGTGC GCGCGCGATC GCCGGACAGT GCCTTTTTAT TCCCTGCCGT
GAACTGGGCA GGCAGGCAGG CTCTGTGCAG AGCGGCAATA CCGTGCTCTT GAGCGCGGTA
TGCGCTTCCG GCGTGCTGCC CTTTGGTGTG GACGCGCTGG AGGCGGCCAT CAAAAAATTC
CTGCCCCCGA AACTTCAGGA GGTGAACCTG AAGGCGCTTG AGCTTGGCAG GCAAGTCCTC
AAGGGCTGA
|
|---|
| Protein sequence | MTMQNKQKRM RVYFTGVGGQ GTLTATTLLA RTALEAGLDV VAGEVHGMAQ RGGVVESVML
LGGWRSPKLD LGEADVMLGF EPLETLRGLP YLRQGGTVFS SSDALPPVGV SLGKAVYPDM
AHIESSARAI AGQCLFIPCR ELGRQAGSVQ SGNTVLLSAV CASGVLPFGV DALEAAIKKF
LPPKLQEVNL KALELGRQVL KG
|
|---|
| |