| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0380 |
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| Symbol | |
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| ID | 7284037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 456912 |
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| End bp | 458579 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643581164 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002478971 |
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| Protein GI | 220903659 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAC ATACTATGGG CACTGTCGCG CAAGGACGCA AGGGGGCAGG TGCCGGTATT
CGCCTTTGTG TGCTGGCTGC CCTGTGCTGC CTGCTGCTGG CCGGAGGCTG CGCCTCGCGC
CAGGGCGGCT CGGGTGGCGG CGGTGCTTCT TTTTCCGTCC CTGATGACGA TCCCACGCCC
TTGAGTCCCA AAGAGGTCGC TGCCCTCAAT TCTACCGGGC ATGTTGATAA AAGCCTGCCC
CCGGAAGCTA TGGACGATGT GGCACGTCAA TATAAGTATT TTTTGCGCAA GGGACGCAAT
TCCGTATGTG TGTTCTCGAA ACGCGCGGAA AACTACCTGG CCTATGCCCG CAAGGTGTTT
CGCTCGCGCG GCATGCCCGA AGAACTGGCT TACCTTGCCA TTGTGGAAAG CGGGTACAGG
GTGGACGCCC GTTCGCCTGT GGGCGCTACC GGAGCCTGGC AGTTCATGCC GCCTACGGGT
GAGCGCTTCG GGTTGACGCA GAACTGGTTT ACTGACGAAC GCCTTGACCC GTACGAATCC
ACGGAGGCTG CGGCGGACTA TCTGCAGAAG CTGCACGAGT ATTTCGGCGA CTGGCCCACG
GCCATCGCGG CCTATAACGC GGGTGAAGGC AAGATCGGCC GTGCCAAGGC GGGTACAGGC
GGCAAGGATT TTTTTGAGGT CAAGGCCCGC AATCACATGC TGGATGAAAA AGCGCAACTG
CGCGATGAGA CCAAGCAGTA TGTGCCGCGC TTTCTGGCAG TTACAAAAAT CATGCGTAAT
CTGCCCGAAC TGGGTTTCGA GCCGATCAGT CCCGAAAGCG CGCCCGGCGT GCTGCGCCTT
ACGGCGCGCC CCGGAACCGA TCTCAACGGC CTGGCTGATG CCTGCGGCAT GAGCTGGGGC
GATTTCATTT CCTATAACCG TCATCATAAA CGCCGTATTA CTGATACGGA CCGTTCCACC
TTTGTCTATG TTCCCGCCAG AATAGAGCGC CAGGCCACGG CCTTTCTTTC TTCGCCCCGT
TGCACCGCCT ATGCGGACTG GGGCGCGGTG CGCGTGGCCA GCAATGCGGA TTCGTGGGAC
AAGATCAGCC GCCGTTGCGG TATCCCTGCG ACGCAGTTGC GCGCCCTTAA TCCCGGTGAA
AGCCGCCTGC GCGCCGGGCA GACCGTGCTT GCGCCGCGCT CGGTGGACAT GTCCTCCAGG
GCTGTGGCCG CGCTGGACAA CAAGGTTCAG GCCCAGTCGG GCAACCGGGG GCGGGCTTCG
GCACAGCCAG CAGGACGGCA GACAGCGGCG CAGGGCGGCA GTCATACGCT TCAGGCTGGT
GAAACCCTGT ATGCCGTGGC CCGTCAGTAT AACATCAGCG TGAAGGACCT TCAGGACCAT
AATAATATAA GCAGTCCCAA TATGATTCAT GCCGGAACCG TGCTGCGCAT CCCCGCCCGC
GCCGTGGCCC AGGCCGGGCC TGTTTCCGGC GGATCTGACG GCAGGGTGGG GCGCAAGGCC
GGTAGCGGAG CGGCAAAGGC CGCCAAAAGC ACCTATCTTG TGCAGGCCAG AGACAGCCTG
TGGAAGATCG CCCGTGAACA TAATGTAAGT GTTGAAGACC TCAAGCGTTG GAACGGTGTG
GATGAAAAGA CCCTGCGGGC CGGATCCGTG CTGGTGGTGG AGCAGTAG
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| Protein sequence | MTEHTMGTVA QGRKGAGAGI RLCVLAALCC LLLAGGCASR QGGSGGGGAS FSVPDDDPTP
LSPKEVAALN STGHVDKSLP PEAMDDVARQ YKYFLRKGRN SVCVFSKRAE NYLAYARKVF
RSRGMPEELA YLAIVESGYR VDARSPVGAT GAWQFMPPTG ERFGLTQNWF TDERLDPYES
TEAAADYLQK LHEYFGDWPT AIAAYNAGEG KIGRAKAGTG GKDFFEVKAR NHMLDEKAQL
RDETKQYVPR FLAVTKIMRN LPELGFEPIS PESAPGVLRL TARPGTDLNG LADACGMSWG
DFISYNRHHK RRITDTDRST FVYVPARIER QATAFLSSPR CTAYADWGAV RVASNADSWD
KISRRCGIPA TQLRALNPGE SRLRAGQTVL APRSVDMSSR AVAALDNKVQ AQSGNRGRAS
AQPAGRQTAA QGGSHTLQAG ETLYAVARQY NISVKDLQDH NNISSPNMIH AGTVLRIPAR
AVAQAGPVSG GSDGRVGRKA GSGAAKAAKS TYLVQARDSL WKIAREHNVS VEDLKRWNGV
DEKTLRAGSV LVVEQ
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