Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0222 |
Symbol | |
ID | 7283876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 277508 |
End bp | 278539 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643581005 |
Product | integrase family protein |
Protein accession | YP_002478815 |
Protein GI | 220903503 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.948796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTG GCTGCAAAAA AAACGGAACA TGGTACGTAC AATACCGCAT CCCTGGGGAG AAATACCCAC TCCGCGAATA CACGGGAATT GGCGAGGAAG GCAAAACCGC AGCCCGTGAA CTAGACAGGC AGGTCAAAGA GCAGAAAGCA AAGGGGGCTG TTACTAAGCG GGTACAACGG ACTGGCCGGA TACACCTGGA TCAGTTGGCC CAAGCATATC TCACTGAGAG GAAATTGAGC GGAAAATCAG CACAATGGCT TGAAGAGATG GAAACTCTTT TCAACAAAAA AATCTTGCCG AGGTTATGCT TTTGCCCTGT TGATGATCTC AAATACCCAG ACGTTATTGC TATGGCCGCC GAAGCTTGGC CCACAGTCTC CCTGGCAACT CGGCAGCGAT ACCTTGGCTA TCTCAAGGCG GCTTTCAACT TTGGGCGCAA GCATGAACTC ACCGCCACTA ATCCACTCGA CAAGTGGGAG CGGCAGAAAG AGCCACGTCT CGAATTCAAC TTTTCTGTCC CTGACCTCCT AAAGCTATAT GACTGCGCAG CACCACACCT CGCGTGGGCA ATAAAAGTAG AGTGGCACAT CGGCACTCGC CCAGGCCGTT CAGAACTCTT TGCCCTCCGA TGGCGACATA TCGACTTTGA ATCTAGGATC ATCAAAATAT ATGGGACAAA AACCGACGGT TCCTTTCGTG CCGTCCCCAT GCTCCCACAC TTCGAGGCTG CACTTAAAGA AAAGCGGAAA CAAGCCCTGG GGGAGTTTGT TGTTGACTAC AAAGGGCGGC AGGTAAAAAA GTTACAGACA GCGTTTGAAG GAGCGCAAAG ACGTGCAAAT CTTGGATACC ACGTTCGCCT GTATGACATT CGCCACCTAT TTGCCACCAC CATGCTTAAT GGCGGTGCGG ATCATGCTGC CGTTGCTAAA CTTTTGGGGC ATAGCGCCGT CTCGACGACA CACAAATGGT ACTACCACGT CTTACCTGGC GAGACTCGTC GCGCTTTGGC CGTAAAGCCT GACCCCTTCT AG
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Protein sequence | MSIGCKKNGT WYVQYRIPGE KYPLREYTGI GEEGKTAARE LDRQVKEQKA KGAVTKRVQR TGRIHLDQLA QAYLTERKLS GKSAQWLEEM ETLFNKKILP RLCFCPVDDL KYPDVIAMAA EAWPTVSLAT RQRYLGYLKA AFNFGRKHEL TATNPLDKWE RQKEPRLEFN FSVPDLLKLY DCAAPHLAWA IKVEWHIGTR PGRSELFALR WRHIDFESRI IKIYGTKTDG SFRAVPMLPH FEAALKEKRK QALGEFVVDY KGRQVKKLQT AFEGAQRRAN LGYHVRLYDI RHLFATTMLN GGADHAAVAK LLGHSAVSTT HKWYYHVLPG ETRRALAVKP DPF
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