Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0061 |
Symbol | nusA |
ID | 7283712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 79744 |
End bp | 81093 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643580846 |
Product | transcription elongation factor NusA |
Protein accession | YP_002478659 |
Protein GI | 220903347 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.941395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTTG AACTTAAAAA GGCCATTGAC CAGATCAGCA AAGACAAGGG CCTTGACCGC AACATGCTCA TCGACACGCT TGAAGACGCG GTGCGTACCT CCGTGCTGCG CCGCTTCAGT GAAGATATGG ATGTGGAAGT ATCCTATAAT GACGAAACGG GCGATATTGA GGTCTACCAG TTCAAAATCG TGATGGCCGA CGGCGACGTG GCCAATCCCG ATACGCAGAT AGAACTTGCC GAAGCCCGCG AGCACGATCC TTCCGTTCAG GTGGACGACG AAATGGGCTT CCGCGTCAAG GTTGAAGACC TTGGCCGCAT CGCCGCCCAG TCTGCCAAGC AGGTTATCAT TCAGCGTATG CGCGACGCCG AACAGGAAAT TATCTACGAG GAATACAAGG ATCGCGTGGG TGAAATCGTT TCGGGCATCG TGCAGCGCCG CGACAAGGGC GGCTGGGTGG TCAACCTGGG CCGCACCGAA GCCATCCTGC CCCGCGAAGA GCAGATCCCG CGTGAGCATT ACAAGCGCGG CGACCGCGTT CAGGCCCTCA TTATCGAAGT GCGCCAGGAA GGGCGCGGTC CGCAGGTGGT CATATCCCGT GCGCACCGCG ACTACATGGC CGCCCTCTTC CGCCGCGAAG TGCCGGAAGT GGACGACGGC GTGGTGCAGA TTATGGGCGT TGCCCGTGAT CCCGGCTCAC GCGCCAAGGT TGCCGTGCTC TCCCGTGAGC GTGACGTGGA CCCCGTGGGC GCCTGCGTTG GCGTGCGCGG CTCGCGCATC CAGAATATCG TGCAGGAGCT GCACGGAGAG CGCATCGACA TTGTTGTGTG GAGCGCCGAT ATTGCCACCT ACGCCCGCAA CGCCCTGGCC CCGGCCCTGG TATCGCGCAT TGTGGTGGAT GAAGAAGAAA ATCTGCTCGA AGTCATCGTG CCGGACGACC AGCTCACCAA CGCCATCGGG CGCAAAGGGC AAAACGTCAA GCTGGCCGCT CGCCTTCTGG GCTGGAAAGT CGATATATTC ACCGAGACCC GCTACAACGA GGCCAACGCC ATCGGCCACG GTCTCGAGCA GGTGGCCAGT GTGGCCGAAG TGTCCATTGA GGCTCTGCTT GGCGCGGGCT ACAGCTCGCT TGACCAGCTG CGCCAGGCCA CGGACCAGGA ACTGTCCGAC AAGCTGACCA TCAGCGCGTC GCGCATTGCC GACCTTCGCT CGGCCATCAA CTTCCTGGCT CCCGTGGTAG AAGAAACGCC CGAATCCTCC GCTGTGGAAC TGGGCCGGAC GCATGCCGAC GAGGAAGACT CCGGTCAAGA CCAGACCGGC GACAGTCCCC GCGAGGATGC GCAAGATTAG
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Protein sequence | MNLELKKAID QISKDKGLDR NMLIDTLEDA VRTSVLRRFS EDMDVEVSYN DETGDIEVYQ FKIVMADGDV ANPDTQIELA EAREHDPSVQ VDDEMGFRVK VEDLGRIAAQ SAKQVIIQRM RDAEQEIIYE EYKDRVGEIV SGIVQRRDKG GWVVNLGRTE AILPREEQIP REHYKRGDRV QALIIEVRQE GRGPQVVISR AHRDYMAALF RREVPEVDDG VVQIMGVARD PGSRAKVAVL SRERDVDPVG ACVGVRGSRI QNIVQELHGE RIDIVVWSAD IATYARNALA PALVSRIVVD EEENLLEVIV PDDQLTNAIG RKGQNVKLAA RLLGWKVDIF TETRYNEANA IGHGLEQVAS VAEVSIEALL GAGYSSLDQL RQATDQELSD KLTISASRIA DLRSAINFLA PVVEETPESS AVELGRTHAD EEDSGQDQTG DSPREDAQD
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