Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0056 |
Symbol | |
ID | 7283707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 73067 |
End bp | 74131 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643580841 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002478654 |
Protein GI | 220903342 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAAA AAGATAACGT GGCACAAGCC CGCCCTTTTC AATGCCCGGA AAGTCCGGCG CCGAACAGTC CCCTTGCGGG AGGTTCGGGG CCGAGCGCTT ACGGGCAGCA TGAACAAAAC GCCGACAGCG CGACGCACGG GCAAACCCGT CGTACGCCTC CCCTGCCGCA GCAACATGGC GTACTTGTGC TCAACAAGCC TTCCGGCCCC ACCTCGGCCC GTTGCCTCAC CGCCATAAAG CGGCTGGGAC AAAAAAAGAT CGGCCACGCC GGCACACTGG ACCCTCTGGC TTCAGGTGTG CTGCTGGTGC TGCTCGGGCA GGCCACCAAA CTTTCCGGCC ATCTCATGAG CGGGGGCGGC AAGGTTTATA ACGGCGTGCT GCGCCTCGGG CAAACCACCG ACACCTGGGA CATCGAAGGC CAGGTTACGG CTGAAGCCCC CTGGCAGCAC ATCAGTGAAG ACGATGTGCG GCGAGAGGTC ACGGCATGGC TGCAACTGAC AGAGCAGCCT GTTCCGTCCT ATTCCGCCGC AAAACACGAA GGGCAGCCCC TGTACAAGCT GGCCCGCAAA GGGCTTGATG CCCCGCAAAA GACAAAGTTT ATGGAAATTT CACAGGCGGA CGTGCTTGAA ATAAGCCTGC CGCTTGTGCG CTTTCGGGTC GCATGCAGTT CCGGCACCTA TATACGCTCC CTGGCCCACA GCTTGGGGAT GCGACTTGGA TGCGGAGCCG TGCTCACGGA ACTGACCCGG GAGTACAGTC ACCCCTTCGG CCTTGATGTG GCCCGCGATC CCGCGGACTT CACGGCTGAC CCCACCCTGT TGCCCGGCTG CGTTATCCCC GTTGCGGATG CGCTGCCTCA CTGGCCCAGG GTGGACCTCA CGCCGGAAGA AGCCGCCCGC GTACGTAATG GCATGGCTGT GTCTTGCCGT ACGCCACAGG CTGACGCCGC CCCCGGCGAC GAACTCGCAT TTCTGATGGA TCAGGGGCAA GCCCTGGCCT TGGCAAAACG CGAGATCACG CCCGCCGGGC CGTGCTGGGC CGTAATGAGG GGACTTTGGA ACTAG
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Protein sequence | MVKKDNVAQA RPFQCPESPA PNSPLAGGSG PSAYGQHEQN ADSATHGQTR RTPPLPQQHG VLVLNKPSGP TSARCLTAIK RLGQKKIGHA GTLDPLASGV LLVLLGQATK LSGHLMSGGG KVYNGVLRLG QTTDTWDIEG QVTAEAPWQH ISEDDVRREV TAWLQLTEQP VPSYSAAKHE GQPLYKLARK GLDAPQKTKF MEISQADVLE ISLPLVRFRV ACSSGTYIRS LAHSLGMRLG CGAVLTELTR EYSHPFGLDV ARDPADFTAD PTLLPGCVIP VADALPHWPR VDLTPEEAAR VRNGMAVSCR TPQADAAPGD ELAFLMDQGQ ALALAKREIT PAGPCWAVMR GLWN
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