Gene Ddes_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0052 
Symbol 
ID7283703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp68695 
End bp69171 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID643580837 
Productprotein of unknown function DUF107 
Protein accessionYP_002478650 
Protein GI220903338 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC CTTTACTCTG GTTTATTCTG GGGGCGGCCT TTTTTGTGGC CGAACTCATG 
ACCCCGGCCA TGGTCCTGCT CTTTTTCGGT GTGGGCGCCT GGGTCGCGGC CCTGACTGCC
CTTATGGGCC TGGGCCTTGC ATGGCAGCTC ATCACCTTCA TCTGCCTTTC CCTGCTTACC
CTGCTCTTTT TGCGCCGCCG CCTGCGGGCG GTCTTCGGCG GGCGCGCCCA CCGCGTACCT
GCCGGAAACT GCAACAGCCA CGGTGAAGAA TCCTGCTCCC CGCATCCCCT TACGGGCAGG
CAGGGCGTCG TCAGCAAGGC CGTTCACCCC GGAAAAATCG GAGAAGTAAG CATTGACGGC
AGCTTCTGGC GGGCCACAGC CCATGAAAAA CTGGCTGAAG GCAGCCCGGT GCGCGTACAG
GGGGCAGACC CCGGCGATGC ACTGGTTCTG CATGTAAGCC CGGCAACAAA ATCCTGA
 
Protein sequence
MNAPLLWFIL GAAFFVAELM TPAMVLLFFG VGAWVAALTA LMGLGLAWQL ITFICLSLLT 
LLFLRRRLRA VFGGRAHRVP AGNCNSHGEE SCSPHPLTGR QGVVSKAVHP GKIGEVSIDG
SFWRATAHEK LAEGSPVRVQ GADPGDALVL HVSPATKS