Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0010 |
Symbol | aspS |
ID | 7283661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 14407 |
End bp | 16290 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643580795 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002478608 |
Protein GI | 220903296 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000218304 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAGC AGACGGCCCA GGCGGTCGCG CAGGGCCAGG ACGTACAGCA GGAACACCAG AAGTATATCA CCGGCCTTGG CGACTGGCAC CGCAGCCAGA CCTGCGGTGA ACTGACCCTT GCCAATAACG GGCAGGAAGT CTGCCTGATG GGCTGGGTGC AGTACCGGCG CGACCACGGC GGCCTTATTT TTGTAGACCT GCGCGACCGT TCGGGGCTTA CCCAGGTGGT CTTCAGCCCT GATGCCGCCC CGGAAGCCCA TAAAAACGCG CATATCCTGC GTTCGGAATA CGTGCTGGCC ATAAAGGGTC TGGTGCGCCC GCGCCCCGAG GGCATGGTGA ATCCCAACAT GGTCACCGGC GAAATCGAGG TTGTGGTGAC GGAATGGAAG TTGCTCAATA CTTCCAAAAC CCCGCCCTTT ACCATTGAAA ACCGTTGTGA TGCGGGCGAG AACCTGCGCC TTGCCTGGCG TTATCTTGAT CTGCGGCGCC CGCGCATGCA GGACAACCTG CGCCTGCGCC ACAAGGTGGC CCAGTGCATA CGCCGGCATC TGGACGAAGA CGGTTTTGTG GAAGTGGAAA CACCCGTGCT TACCAAGTCC ACGCCTGAAG GCGCACGCGA TTTTCTGGTT CCCAGCCGTC TGAATACGGG CGAATTTTAC GCCTTGCCGC AATCGCCGCA GCTTTTCAAG CAGTTGCTCA TGGTGGCGGG CATGGACCGC TATTTCCAGA TAGTGCGCTG CTTCCGGGAT GAAGATCTGC GCGCCGACCG CCAGCCCGAG TTCACCCAGG TGGACATCGA AATGAGCTTC GCGGACGAAG AAACAGTTAT GGGCATGGCA GAAAAGCTCA TGGCCCGGGT ATTCAGGGAC GTTATGGGCA AGGAACTTTC CCTGCCGTTC CCGCGTATGC CCTGGGACGA GGCCATGGCC CGCTACGGTG TGGACAAGCC CGATACCCGT TTTGGCTTGG AGCTTGTGGA CATTACCGAA ATTGTGCGCG GCTCGGGCTT CAAGCTTTTT GCCACGGCTC CGCTGGTCAA GGGCATGAGG GTTCCCGGCG GCGAAAGTAT GACCCGCAAG GAAATAGACG CCTTTACCGA ATTTGTGAAA ATCTACGGTG CGCAGGGTCT GGCCTGGATC AAGATCAAGG CCGACGAATG GCAGTCACCC ATTGCCAAAT TTCTTTCCGA CGAGGAGCGC AAGGGCATTG CCGCGGCGCT GGATCTTCAG GTGGGCGACA TTGTCTTTTT CCAGGCGGGC GAACCGGGCA TGGTCAATGC GGCACTGGGC AACCTGCGCG TGCACCTGGC GGACCATATG AACCTCATAC CCGAAAACAC CTTTAACTTC CTTTGGGTTA CAGACTTTCC CCTGTACGAA TACGATGAGG AAGAAAAGCG CTACGTGGCC TGCCATCACC CCTTTACCTC TCCGGCCCCC GGGCATATGG AGCTGATGAC CAGCGACCCC GCCCGCGCCC GTGCCCGTGC CTATGACATG GTGCTCAACG GAAGTGAGGT GGGCGGCGGC TCCATCCGCA TCCATTCCGG TGAGGTGCAG CGCCGCATGT TTGAAGCTCT GGGCTTCACG CCCGAGCAGG CCGAAAGCCA GTTCGGCTTC CTTATCCAGG CGTTGGAGCA CGGCGCTCCG CCGCACGGCG GCCTTGCTTT CGGGCTTGAC CGCCTTATCA TGTTACTGGC AGGGGCCAGC AGCATCCGCG ACGTCATTGC CTTCCCCAAA ACGCAAAAAG CCACCTGCCT CATGACGGAC GCGCCTTCGC CCGTGGCGGC CAAACAGTTG CGTGAGCTTG GGTTGCGCCT GCGTGAGCAG CCCGGCGAAA AAGGCAAGAC CGACAAGCCC GGCGAGGCGG AAAAGGCGGA ATAA
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Protein sequence | MAEQTAQAVA QGQDVQQEHQ KYITGLGDWH RSQTCGELTL ANNGQEVCLM GWVQYRRDHG GLIFVDLRDR SGLTQVVFSP DAAPEAHKNA HILRSEYVLA IKGLVRPRPE GMVNPNMVTG EIEVVVTEWK LLNTSKTPPF TIENRCDAGE NLRLAWRYLD LRRPRMQDNL RLRHKVAQCI RRHLDEDGFV EVETPVLTKS TPEGARDFLV PSRLNTGEFY ALPQSPQLFK QLLMVAGMDR YFQIVRCFRD EDLRADRQPE FTQVDIEMSF ADEETVMGMA EKLMARVFRD VMGKELSLPF PRMPWDEAMA RYGVDKPDTR FGLELVDITE IVRGSGFKLF ATAPLVKGMR VPGGESMTRK EIDAFTEFVK IYGAQGLAWI KIKADEWQSP IAKFLSDEER KGIAAALDLQ VGDIVFFQAG EPGMVNAALG NLRVHLADHM NLIPENTFNF LWVTDFPLYE YDEEEKRYVA CHHPFTSPAP GHMELMTSDP ARARARAYDM VLNGSEVGGG SIRIHSGEVQ RRMFEALGFT PEQAESQFGF LIQALEHGAP PHGGLAFGLD RLIMLLAGAS SIRDVIAFPK TQKATCLMTD APSPVAAKQL RELGLRLREQ PGEKGKTDKP GEAEKAE
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