Gene Ddes_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0010 
SymbolaspS 
ID7283661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp14407 
End bp16290 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content60% 
IMG OID643580795 
Productaspartyl-tRNA synthetase 
Protein accessionYP_002478608 
Protein GI220903296 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000218304 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGC AGACGGCCCA GGCGGTCGCG CAGGGCCAGG ACGTACAGCA GGAACACCAG 
AAGTATATCA CCGGCCTTGG CGACTGGCAC CGCAGCCAGA CCTGCGGTGA ACTGACCCTT
GCCAATAACG GGCAGGAAGT CTGCCTGATG GGCTGGGTGC AGTACCGGCG CGACCACGGC
GGCCTTATTT TTGTAGACCT GCGCGACCGT TCGGGGCTTA CCCAGGTGGT CTTCAGCCCT
GATGCCGCCC CGGAAGCCCA TAAAAACGCG CATATCCTGC GTTCGGAATA CGTGCTGGCC
ATAAAGGGTC TGGTGCGCCC GCGCCCCGAG GGCATGGTGA ATCCCAACAT GGTCACCGGC
GAAATCGAGG TTGTGGTGAC GGAATGGAAG TTGCTCAATA CTTCCAAAAC CCCGCCCTTT
ACCATTGAAA ACCGTTGTGA TGCGGGCGAG AACCTGCGCC TTGCCTGGCG TTATCTTGAT
CTGCGGCGCC CGCGCATGCA GGACAACCTG CGCCTGCGCC ACAAGGTGGC CCAGTGCATA
CGCCGGCATC TGGACGAAGA CGGTTTTGTG GAAGTGGAAA CACCCGTGCT TACCAAGTCC
ACGCCTGAAG GCGCACGCGA TTTTCTGGTT CCCAGCCGTC TGAATACGGG CGAATTTTAC
GCCTTGCCGC AATCGCCGCA GCTTTTCAAG CAGTTGCTCA TGGTGGCGGG CATGGACCGC
TATTTCCAGA TAGTGCGCTG CTTCCGGGAT GAAGATCTGC GCGCCGACCG CCAGCCCGAG
TTCACCCAGG TGGACATCGA AATGAGCTTC GCGGACGAAG AAACAGTTAT GGGCATGGCA
GAAAAGCTCA TGGCCCGGGT ATTCAGGGAC GTTATGGGCA AGGAACTTTC CCTGCCGTTC
CCGCGTATGC CCTGGGACGA GGCCATGGCC CGCTACGGTG TGGACAAGCC CGATACCCGT
TTTGGCTTGG AGCTTGTGGA CATTACCGAA ATTGTGCGCG GCTCGGGCTT CAAGCTTTTT
GCCACGGCTC CGCTGGTCAA GGGCATGAGG GTTCCCGGCG GCGAAAGTAT GACCCGCAAG
GAAATAGACG CCTTTACCGA ATTTGTGAAA ATCTACGGTG CGCAGGGTCT GGCCTGGATC
AAGATCAAGG CCGACGAATG GCAGTCACCC ATTGCCAAAT TTCTTTCCGA CGAGGAGCGC
AAGGGCATTG CCGCGGCGCT GGATCTTCAG GTGGGCGACA TTGTCTTTTT CCAGGCGGGC
GAACCGGGCA TGGTCAATGC GGCACTGGGC AACCTGCGCG TGCACCTGGC GGACCATATG
AACCTCATAC CCGAAAACAC CTTTAACTTC CTTTGGGTTA CAGACTTTCC CCTGTACGAA
TACGATGAGG AAGAAAAGCG CTACGTGGCC TGCCATCACC CCTTTACCTC TCCGGCCCCC
GGGCATATGG AGCTGATGAC CAGCGACCCC GCCCGCGCCC GTGCCCGTGC CTATGACATG
GTGCTCAACG GAAGTGAGGT GGGCGGCGGC TCCATCCGCA TCCATTCCGG TGAGGTGCAG
CGCCGCATGT TTGAAGCTCT GGGCTTCACG CCCGAGCAGG CCGAAAGCCA GTTCGGCTTC
CTTATCCAGG CGTTGGAGCA CGGCGCTCCG CCGCACGGCG GCCTTGCTTT CGGGCTTGAC
CGCCTTATCA TGTTACTGGC AGGGGCCAGC AGCATCCGCG ACGTCATTGC CTTCCCCAAA
ACGCAAAAAG CCACCTGCCT CATGACGGAC GCGCCTTCGC CCGTGGCGGC CAAACAGTTG
CGTGAGCTTG GGTTGCGCCT GCGTGAGCAG CCCGGCGAAA AAGGCAAGAC CGACAAGCCC
GGCGAGGCGG AAAAGGCGGA ATAA
 
Protein sequence
MAEQTAQAVA QGQDVQQEHQ KYITGLGDWH RSQTCGELTL ANNGQEVCLM GWVQYRRDHG 
GLIFVDLRDR SGLTQVVFSP DAAPEAHKNA HILRSEYVLA IKGLVRPRPE GMVNPNMVTG
EIEVVVTEWK LLNTSKTPPF TIENRCDAGE NLRLAWRYLD LRRPRMQDNL RLRHKVAQCI
RRHLDEDGFV EVETPVLTKS TPEGARDFLV PSRLNTGEFY ALPQSPQLFK QLLMVAGMDR
YFQIVRCFRD EDLRADRQPE FTQVDIEMSF ADEETVMGMA EKLMARVFRD VMGKELSLPF
PRMPWDEAMA RYGVDKPDTR FGLELVDITE IVRGSGFKLF ATAPLVKGMR VPGGESMTRK
EIDAFTEFVK IYGAQGLAWI KIKADEWQSP IAKFLSDEER KGIAAALDLQ VGDIVFFQAG
EPGMVNAALG NLRVHLADHM NLIPENTFNF LWVTDFPLYE YDEEEKRYVA CHHPFTSPAP
GHMELMTSDP ARARARAYDM VLNGSEVGGG SIRIHSGEVQ RRMFEALGFT PEQAESQFGF
LIQALEHGAP PHGGLAFGLD RLIMLLAGAS SIRDVIAFPK TQKATCLMTD APSPVAAKQL
RELGLRLREQ PGEKGKTDKP GEAEKAE