Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3731 |
Symbol | |
ID | 3758718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3688805 |
End bp | 3689569 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637784653 |
Product | regulatory protein, DeoR |
Protein accession | YP_390219 |
Protein GI | 78358770 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA GCGCGGTTCG ACACAAATCG TTACAGGAGT TCCTTGCCGA GAGGGGATAT GCCACCATCG AAGAACTGGC CGTCCGTTTC GGAGTGACTC CTCAGACCAT CCGTAAAGAT ATAAACACGC TGGCCGCCGA AGGCCGGCTG CAGCGCTTTC ACGGTGGGGC GGGGGTGCCT CTGGGCTCCA GCAACATTGT GTACGATCAG CGTAAATCCA TGTTTATGGA CGAAAAGCGG CGCATAGGCG AGCTGGTGGC CCAGCATATT CCGGAAGGTG CTTCGCTGTG CATAAACATA GGCACCACCA CGGAAGCAGT GGCCCGCGCC CTGCTGGCTC ATAAAGGCCT GCGGGTGGTG ACCAACAGCC TTAACGTGGC TTCCATTCTT GCCCAGAATT CATCACATGA CGTTGTGGTG GCGGGGGGTA CTGTCCGCCA CAGAGACAAC GGCATAGTGG GGCCCAGCGC AGAACGCTTC ATACGCGAAT TCCGGGTGGA TTACGGCATC ATCGGCATTT CAGGCATAGA TGAAGACGGT AATCTGCTGG ATTACGACTA CCGCGAGGTG GCTGTGGCCC GTACCATCAT CGAGTGTTCG CGCCATGTGT ACATGGTGAC TGATAACTCC AAGTTCGGCC GGCCTGCCAT GGTGCGCATG GCGCGCCTGA GCGACCTGAC GGCGCTGTTC TCCAACGGGC CGCTGCCTTC GCCGCAGTGG GAAACGCTGG TAAAGGAATC AGGCGCGGAA CTGTTTCTTG CCTGA
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Protein sequence | MSKSAVRHKS LQEFLAERGY ATIEELAVRF GVTPQTIRKD INTLAAEGRL QRFHGGAGVP LGSSNIVYDQ RKSMFMDEKR RIGELVAQHI PEGASLCINI GTTTEAVARA LLAHKGLRVV TNSLNVASIL AQNSSHDVVV AGGTVRHRDN GIVGPSAERF IREFRVDYGI IGISGIDEDG NLLDYDYREV AVARTIIECS RHVYMVTDNS KFGRPAMVRM ARLSDLTALF SNGPLPSPQW ETLVKESGAE LFLA
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