Gene Dde_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3556 
Symbol 
ID3758536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3516593 
End bp3518569 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content62% 
IMG OID637784471 
Productputative O-antigen acetylase 
Protein accessionYP_390044 
Protein GI78358595 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000981917 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCTACA GAGCGGATAT CGACGGTCTG CGGGCCGTGG CTGTGGCTGC TGTTCTTTTG 
TATCATTTTC AGGTGGGGGC GTTGGCCGGG GGATTTCTGG GGGTGGATGT TTTTTTTGTG
ATCTCCGGAT TTCTGATTAC CGGCATTATC CTGCCCGCCG TGCAGAACAA CACTTTCACC
TTTTCCGGTT TTTACAAAAA GCGCGTGCTG CGTATTTTTC CTTTGTTTGC CGTGGTGCTG
GCGTGCTGTT TTGCTGCCGG CATGCTTATT CTCAGCCTCA AGGAATTCCG GCAGTTTTCA
CAGGATGCGG CGTATGCAGC GCTGGGCGTT TCCAATATCC ATTTTTTTCT GCACACCGGT
TATTTTGACT TGGCGGCAAA AGCGAAGCCG CTGCTGCATA CCTGGTCGCT GGGTGTGGAA
GAACAATTCT ACTTCTGTCT GCCCGTGCTG CTTGTCATGC TGCGTGCGCG CAGCGTCCGC
TTCCGGACTG CGGTTCTGGG GGGGCTTGCG GTCTGCTCGC TGACCGCCAT GCTCGTCACG
GGACGTACAG CGCCGGACGC GGCGTTCTAT CTGCTGCCGT TCAGAGCGTG GGAGCTGCTG
GCAGGGGCTT TGCTGGCAAT GCATACGGGG GCGGTTCATG CAGGGCGCGG CAGCTTGGCG
CTGCGTCAGG CCGTTTCGCT GGGCGGGGCG GCGCTCATAG GCTCCGGCAT GGTGTACGCC
ACCCCCGCCA TGCATCCCGG CTGGGTGACG CTGCTGCCTG TGGCGGGCAC ATGTGCTGTC
ATCTGGGGAG CACATGACAA CCGCACGCTG GTGAACAGAC TTCTGTCGCT TTCTGCCATG
CGGTTTACTG GCCGTATTTC CTATTCACTG TATCTGTGGC ACTGGCCTGT GCTTGTTTTC
GGTGTGATGC TGGGAGGGCC GCTCACACCG CAGCGTACGG CGGTCATGCT GATGTTCTGC
GTGGTGCTTT CGTGGCTTTC ATGGCGTTAT GTGGAGCAGC CGGCACGACA CAGCGAGCGC
CTGCTGTCCG GCTGGCGTCC GGTACAGGTG TTTGTTCCCG TGTTGCTGCT GCTGGTGGCC
GCGGGCATAA CCGGCTTTGC CACCAAGGGG CTGCCGCAGC GGCTCACAGC ACAGGGACGG
CAGATGGAAA CGCTGCGGGC ATTTAAAAAT ACCGATGTGC AGCCGGAAAA ACTGACTGTT
GCCGCCATGA CGCCGCTGGG CGGAGGCAGC GGACACCCGG ACTTTATCGT GTGGGGTGAC
AGCCATGCGG AGCACCTGTA TCCGCTGTTT GTCCGTCTGG CACAGCGGTA CGGTCTGCAC
GGGCTGATGG CCACCCATTC CAACACCATA CCCTCGCTGA ATGTGCAGCT GGGCGAACAG
TACGACGCCG CAGTGCAGTT TAACAGAAAA ATGCTGGAGA CGGTGCGCGC CACGGGTGTG
CGCCATGTGA TTCTGGCTGC CCGCTGGCAG GGCTATCTTG CAGCGCGCAT GTTGCAGGAC
GGCAGCCCCG TGCCGCCGGA CAGAACCGCC GGTGCGGTGT TTGCCTCGGT CGGGCGGCTG
ACGGCAGACC TGCGCGCCAT GGGCTGTACC GTGTGGCTGG TGGAGGATGT GCCTGGCCAC
GCCTTTTCTG CGCTGGATGA ATTGCAGAGG CCGCTGCGGC CCAGCAATGC CGGTGAATTT
GAGTCAACCG CAGCCGCTGC AGCCGATAAA GGGCGTGCCG TTGTCGAGCG GTTTCTCGAT
GGGCAGGCGG CAGCGGGAGT GCAGGTTGTC CGCACACGCG CTCTCTTTCT GTCCGGTGAC
CGCTATCTGG CTGTACGCGG CGGTGTGCCG CTGTACAGGG ATACAAATCA CCTGAGCGCC
CCCGGTGCCC TGCTGCTTGA AGGAGCGCTG TGGCCTGCGC TGGCACAGAT AGGGACCGAC
CGTGTTGTGG CGCACCGCAC GGCACCTGTC CTTGCCCCGC AGAACTCCCG CCCGTGA
 
Protein sequence
MRYRADIDGL RAVAVAAVLL YHFQVGALAG GFLGVDVFFV ISGFLITGII LPAVQNNTFT 
FSGFYKKRVL RIFPLFAVVL ACCFAAGMLI LSLKEFRQFS QDAAYAALGV SNIHFFLHTG
YFDLAAKAKP LLHTWSLGVE EQFYFCLPVL LVMLRARSVR FRTAVLGGLA VCSLTAMLVT
GRTAPDAAFY LLPFRAWELL AGALLAMHTG AVHAGRGSLA LRQAVSLGGA ALIGSGMVYA
TPAMHPGWVT LLPVAGTCAV IWGAHDNRTL VNRLLSLSAM RFTGRISYSL YLWHWPVLVF
GVMLGGPLTP QRTAVMLMFC VVLSWLSWRY VEQPARHSER LLSGWRPVQV FVPVLLLLVA
AGITGFATKG LPQRLTAQGR QMETLRAFKN TDVQPEKLTV AAMTPLGGGS GHPDFIVWGD
SHAEHLYPLF VRLAQRYGLH GLMATHSNTI PSLNVQLGEQ YDAAVQFNRK MLETVRATGV
RHVILAARWQ GYLAARMLQD GSPVPPDRTA GAVFASVGRL TADLRAMGCT VWLVEDVPGH
AFSALDELQR PLRPSNAGEF ESTAAAAADK GRAVVERFLD GQAAAGVQVV RTRALFLSGD
RYLAVRGGVP LYRDTNHLSA PGALLLEGAL WPALAQIGTD RVVAHRTAPV LAPQNSRP