| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3281 |
|---|
| Symbol | |
|---|
| ID | 3758258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3270700 |
|---|
| End bp | 3271662 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637784194 |
|---|
| Product | radical-activating enzyme |
|---|
| Protein accession | YP_389770 |
|---|
| Protein GI | 78358321 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | [TIGR02494] glycyl-radical enzyme activating protein family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGAACCG CAACACACAG AGACGACACC GTGATTGAAA GAAAAGCACT GATTTTCAAC
ATACAGAAAT ACAACATGTA TGACGGTCCG GGCGTGCGGA CTCTGGTGTT CTTCAAGGGG
TGTCCCTTGC GCTGCAAGTG GTGCTCAAAT CCCGAAGGGC AACTCCGGCA GTATCAGGTT
CTGTACAAGG AGAACCTGTG TGTGCACTGC GGAGCCTGTG TGCCTGTGTG CCCTGCCGGC
GTGCACACTA TCTCTGCCTC CACATTGCGC CACGGGTTTG CGGAAGGAGC ACAGTGCATC
GGCTGCCGCC GGTGCGAAGA TGTCTGTCCT TCCTCTGCGC TTGCCGTGGT GGGCGAGCAG
AAAACCATAT CGGAACTTCT GGAAGTCATC GAAGAGGACA GGCCTTTTTA TGAAACCTCC
GGCGGCGGGG TGACGCTGGG CGGCGGCGAA GTGCTCATGC AGCCCGAGGC GGCCGTGAAC
CTGCTGGCAG CCTGCAAGCA GCACGGCATC AACACCGCCA TCGAAACCTG CGGCTATGCC
AAACAGGAAG TGGTCATGAA GGCTGCCCAG TATGTCGATC TCTTTCTGTA CGACGTCAAA
CATATCGATT CCGCAAGGCA TTACGAACTG ACCGGCGTGC GCAACGAGCT GATTCTGAGC
AACCTTACCT GGCTGCTGGA AAACAAGCAC AATGTGAAAA TACGGGTGCC GCTGCTGCGC
GGGGTCAACG ACAGTGAAGA CGATCTGCGC GGACTGGTCG AGTACCTCAG ACCGTATCAG
GATTACAAAA ATTTCAAAGG CATAGACTTG CTGCCCTACC ACAAGATGGG TGTGGGCAAG
TACAAGCAGC TGGGCTGGGA ATACCCCATT GAGGGCAACC CCGCACTGAG CGATGCCGAC
CTTGAACGTG TCGAGGCCTG CATCCGCAAA TATGACTTTC CGGTTTCGGT GATCCGCCAC
TGA
|
|---|
| Protein sequence | MRTATHRDDT VIERKALIFN IQKYNMYDGP GVRTLVFFKG CPLRCKWCSN PEGQLRQYQV
LYKENLCVHC GACVPVCPAG VHTISASTLR HGFAEGAQCI GCRRCEDVCP SSALAVVGEQ
KTISELLEVI EEDRPFYETS GGGVTLGGGE VLMQPEAAVN LLAACKQHGI NTAIETCGYA
KQEVVMKAAQ YVDLFLYDVK HIDSARHYEL TGVRNELILS NLTWLLENKH NVKIRVPLLR
GVNDSEDDLR GLVEYLRPYQ DYKNFKGIDL LPYHKMGVGK YKQLGWEYPI EGNPALSDAD
LERVEACIRK YDFPVSVIRH
|
|---|
| |