Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3195 |
Symbol | |
ID | 3758170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3184423 |
End bp | 3185679 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637784106 |
Product | rubredoxin-oxygen oxidoreductase |
Protein accession | YP_389684 |
Protein GI | 78358235 |
COG category | [C] Energy production and conversion |
COG ID | [COG0426] Uncharacterized flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00034081 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCTG CACGCATTAT CAGCAGCAAA ACACATACAC AGGACGAAAC AATGAAAGCA CTGGAAATAA AAAAGGACGT GTTCTGGGTA GGCGCGGTGG ATTACGACAG CCGCGACTTT CACGGATATT CGCTGTCGCC GCAGGGCACC ACATACAATG CCTACGTGGT TAAAGACGAA AAAACCGTTC TTTTCGACAA CGTGAAAGAA GGCTTTCTGC CCACCATGCT GTGCCGCCTG TCTCAGGTGA CCGAGCTGGA AAAGATAGAC TACATTGTCT GCAACCACCT TGAGCCCGAC CATGCCGGTT GCCTGCCCGA ACTCATCGAA CGCTGCAAGC CCGAAAAAAT TTACTGCTCG CCCATGGGCA AACGTTCCAT GGAAGCGCAC TTCGACACCA CCGGCTGGCC CGTGGAAGTG GTGAAAACAG GCGATTCCAT CAATATCGGC AAGCGTGACA TCCAGTTCGT GGAAACCCGC ATGCTGCACT GGCCTGATTC CATGGTGTCC TACATTCCGC AGGACAAGCT GCTCATCTGC AACGACGCCT TCGGCCAGAA CATAGCCTGC ACCGAACGGT TCGCCGATGA AATCGACCGT GCCCATCTGG CCCACGCCAT GAAGGAATAT TACCACAACA TCGTGCTGCC TTTCTCGCCC ATTGTCATCA AGACGCTGGA CCTGCTGGCC GAACTGAAGC TGGACATAGA CATGCTGGCC CCCGACCACG GTCTTATTTT CCGCGGCGAA GACGTGCAGT ATGCACTGGA CTCGTACCGC AGCTTTGCCC AGCAGAAGCC CCGCAAACGG GCTGTAATCG TATTTGACAC CATGTGGCAT TCCACCGAGA AAATGGCCCG CGCCATTGCC GACGGGCTGG AAGCCGAAGG AGTGCCTGCC CGCCTGATGT GGCTGAAGGC CAACCACCAC AGCGCCGTGA TGACAGAACT GGCAGACTGC GGCGCCGTGA TTGTCGGCTC GCCCACCCAC AACAACGGCA TCATGCCCAA CGTGGCAAAA ATGCTCACCT ACATGAAAGG TCTGCGTCCG CAGAACAAGG TGGCCGCAGC GTTCGGTTCG TTCGGCTGGT CCGGTGAATC CGTCAAAAAC ATCACCGGAT GGCTGGAAGA CATGGGCTTT GAAGTGCCCG CTGAAGGCGT GAAGTGCAAA CATGTGCCCA AGCACGAAAC GTATGAAGAA TGCTACAATC TTGGCAAGGC AGTCGCTCAG GCGCTCAAGG CCAAGTGCGA AGCCTAG
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Protein sequence | MQAARIISSK THTQDETMKA LEIKKDVFWV GAVDYDSRDF HGYSLSPQGT TYNAYVVKDE KTVLFDNVKE GFLPTMLCRL SQVTELEKID YIVCNHLEPD HAGCLPELIE RCKPEKIYCS PMGKRSMEAH FDTTGWPVEV VKTGDSINIG KRDIQFVETR MLHWPDSMVS YIPQDKLLIC NDAFGQNIAC TERFADEIDR AHLAHAMKEY YHNIVLPFSP IVIKTLDLLA ELKLDIDMLA PDHGLIFRGE DVQYALDSYR SFAQQKPRKR AVIVFDTMWH STEKMARAIA DGLEAEGVPA RLMWLKANHH SAVMTELADC GAVIVGSPTH NNGIMPNVAK MLTYMKGLRP QNKVAAAFGS FGWSGESVKN ITGWLEDMGF EVPAEGVKCK HVPKHETYEE CYNLGKAVAQ ALKAKCEA
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