| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3124 |
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| Symbol | |
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| ID | 3758098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3114943 |
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| End bp | 3117366 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637784034 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_389613 |
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| Protein GI | 78358164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.31223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTT TTCTCACATA CTTTCTTGTC AGCGTCACAG GTCTTGCCCT GCTGGGCATG
CTCGGGCTGG GCGGCATCTA TATATGGGCC ACCAAAGACC TGCCCGGCTT TACCCGTATC
ACCGATTACC GCCCGCCGCT GGTCACCACG GTGTACGCGC GCGATAACAG CATTCTGGGG
TATTTCTACC GCGAAAAACG CTTTCTGGCG CGCCTTGATG AAATGCCGCA GCATCTGCCT
CTGGCCTTTC TCGCCGCAGA GGACGACTCC TTTTACCGGC ATGAAGGCAT AGACTTCCGC
GCCATTCTGC GCGCCTTCAT GAAAAACATG CAGGCAGGCA CCATCCGGCA GGGCGGTTCC
ACCATCACAC AGCAGGTCAT CAAACGCCTG TTGCTTACTT CCGAACGCAG CTACGAGCGC
AAGATAAAAG AAGCCATTCT GGCCTACCGG CTGGAACGCT ATCTGAGCAA AGATGAAATT
CTGACCATAT ACCTGAACCA GATATATCTC GGCGCGGGGG CATATGGCGT GGAAGCCGCC
GCGCGCAGCT ACTTCGGCAA ACATGTGGGC GAACTGTCCA TAGCCGAATC TGCGCTGCTG
GCCGGTCTGC CGCAGGCTCC TTCCAAATAC AACCCGCTCA ACAACCCGCA GGACGCATAC
ACCCGTCAGC TGTATGTGCT GCACCGCATG CTTCAGCTCG GGTGGATAAC ACCCTCGCAA
TACGACGCGG CCATCAATGA AAAGCTTGTG TTCACCTCCA TGGCCGATCC TTCGTGGGGC
ACCGGCGCAT GGTATCTGGA AGAAGTGCGC CGCAGGCTCA TCGACTATCT GAGCGAAGAC
AACATGGAAA AACTGGGCAT CAAGCTGGAA CGCTACGGCG AGGACGCCGT GTATGAATCC
GGCCTGCATG TTTACACCGC CATGGACCCC AAGCACCAGA AGTACGCCGA ACAGTCACTG
CGCGACGGGC TGGTGGCCTC TACAAAACGG CGGGGCTGGC GCGGCCCTGT GGAGCATCTG
GAAAGCAAGG AAGCACGCGA AGCTTTTCTG CGTGACAACC CCGTGGATGC GGCGGCAATG
CAGCACGAAG GCTGGATAAA AGTGCTGGTC ACCCGCGTGA CGGCCGCAGG GGCCGATGTG
CGCTTTGGCA GCTACAAGGG CCGGATGGAC GTGGAAACCA TGCACTGGTG CCGTACGCCC
GACCCCACCG TGGTGACGGA CTATGTGCCC GCCGTGAAAG ATGCCCGTAC GGTGGTCAAA
GCGGGCGATG TGGTATGGGC GCAGCTTATG CTGCCCGATG CGGGCAAAAG CTTTGATGCC
GCCTCCGTCA CGCCTGATAC GGACTTTTCA CTGGCCATCG CGCAGTACCC CGAAGTGCAG
GGGGCACTGG TTTCCATAGA ACCGCAGACG GGCGATGTGG TGGCACTGGT CGGCGGCTAT
TCCTTTGCCG ACAGCCAGTA CAACCGCGCC GTGCAGGCCA AACGCCAGCC CGGTTCCGCT
TTCAAGCCCA TTGTCTATTC CACCGCGCTG GACAACGGCT ACACACCGGC ATCCACGGTA
CTGGACGCCC CGTTTGTCTA TACCGACGAC GCCACGGCCA AAACATGGCG CCCCGAAAAC
TTTTCGGGAG AATTCTACGG CCCCACGCTG CTGCGCACCG CGCTGGTCAA ATCGCGTAAC
CTGTGTACCA TCCGCATTGC ACAGGACATC GGCATACCGG CCATTGTCGA ACGGGCCAAA
GCACTGGGAC TTGAAGGGCC CTTCCCCTTC GACCTTTCGG TAAGTCTGGG GTCTGTGGCC
GTTTCGCCTC TGAACCTTAC AGAAGCATAC ACGGCGTTCG CCCATGAAGG TCTGCGCGCA
CAACACCGCA TGATCACCGG CATCAAATCG GCATGGGACG AACCCATAGC CACCTTTGAG
CCGCAGCAGA CAGAAGCGCT GACACCGCAG AACGCCTATA TCATGGCGTC GCTGATGAAA
GAGGTAGTGC GCGACGGCAC CGGCTTCCGC GCACGGGTGC TCAAACGTCC TCTGGGCGGC
AAAACCGGCA CATCCAACGA CGAGCGTGAC GCATGGTTTG TTCTCATCTC TCCGTACCTT
GTCTCGGTGT CCTATGTGGG CTTTGACGAC CTGACCCCCA TGGGCAAATG GGAAACCGGC
TCGCGGGCGG CATCGCCCAT TGTGGTCGGC TACCGTCAGG GTGTGGAAGA AGACTACCCC
GTACAGGATT TTCCCATGCC TCCCGGCATC GTGCAGGTGC GCATTGACGG CAAAACAGGA
AATCTTGCGG GACCCGGCTC TGAAACAAGT TACTTCATGC CTTTCAAGGA AGGAACCCAG
CCCACCGTGG TGGAAGGTTC CGCCCCCCGC CACGGCGCCG ACGACGCCCG CAGCGGCGAA
GACCTTATGA AGCAGATGTT CTGA
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| Protein sequence | MKRFLTYFLV SVTGLALLGM LGLGGIYIWA TKDLPGFTRI TDYRPPLVTT VYARDNSILG
YFYREKRFLA RLDEMPQHLP LAFLAAEDDS FYRHEGIDFR AILRAFMKNM QAGTIRQGGS
TITQQVIKRL LLTSERSYER KIKEAILAYR LERYLSKDEI LTIYLNQIYL GAGAYGVEAA
ARSYFGKHVG ELSIAESALL AGLPQAPSKY NPLNNPQDAY TRQLYVLHRM LQLGWITPSQ
YDAAINEKLV FTSMADPSWG TGAWYLEEVR RRLIDYLSED NMEKLGIKLE RYGEDAVYES
GLHVYTAMDP KHQKYAEQSL RDGLVASTKR RGWRGPVEHL ESKEAREAFL RDNPVDAAAM
QHEGWIKVLV TRVTAAGADV RFGSYKGRMD VETMHWCRTP DPTVVTDYVP AVKDARTVVK
AGDVVWAQLM LPDAGKSFDA ASVTPDTDFS LAIAQYPEVQ GALVSIEPQT GDVVALVGGY
SFADSQYNRA VQAKRQPGSA FKPIVYSTAL DNGYTPASTV LDAPFVYTDD ATAKTWRPEN
FSGEFYGPTL LRTALVKSRN LCTIRIAQDI GIPAIVERAK ALGLEGPFPF DLSVSLGSVA
VSPLNLTEAY TAFAHEGLRA QHRMITGIKS AWDEPIATFE PQQTEALTPQ NAYIMASLMK
EVVRDGTGFR ARVLKRPLGG KTGTSNDERD AWFVLISPYL VSVSYVGFDD LTPMGKWETG
SRAASPIVVG YRQGVEEDYP VQDFPMPPGI VQVRIDGKTG NLAGPGSETS YFMPFKEGTQ
PTVVEGSAPR HGADDARSGE DLMKQMF
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