Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3016 |
Symbol | |
ID | 3758006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3000757 |
End bp | 3002814 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637783922 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_389505 |
Protein GI | 78358056 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAATC ACATTCTGAA ACGCGACGGC AGACTGGAAA CCTGGTCCAC AGACCGCATC GCAGGCGCCA TCTTTAAATC TCTCAAAGCC AGCGGCATCA AAGATCCCCT GCTTTCCAAG CGCCTTGCCC GCAAGGTTGA GGAAAAACTG AACGACGAAG ACACGCCCGA ACAGGAACGC GTGCAGGACA TGGTACAGCA GGTGCTGATG GAAGCACGCC TGTACAATGT TGCAGAGCGT TACATTATCT ACCGCGAAAA ACGCCGCGAG ATGCGTTCGC AGGGGCAGGC GTATCTTGAT ATTTCGCAGA TGATCGAAAG CTATCTTGAC CGCAGCGACT GGCGCGTGAA TGAAAACTCC AACATGGGGC ATTCGTTTCA GGGACTGATT CTGCACATGG CAGGTTCGGT ACAGGCCCGC TATGTGCTGG AAAAATACCC CGAAGAAATC CGGCAGGCGC ATCAGCACGG TTATTTCCAT ATCCATGACC TGTCGTTCGG TCTTGCCGGG TATTGCGCCG GCTGGAGCCT GCGCGACCTG CTGCTTGAAG GATTCAATCT GGCTGGGCGC TGCTCTTCCG CACCTGCCCA GCATTTTGAT GCGGCATGCG GACAGATTGT CAACTTTCTG GGCACGCTGC AGAACGAGTG GGCCGGTGCT CAGGCGTTCA ACAACGTGGA TACCTACCTT GCCCCGTTTG TGCGCAAGGA CGGCCTGACC TACAAGCAGG TCAAGCAGCG CATGCAGAAC CTTGTGTACA ACCTGAACAC CACCTCGCGC TGGGGCGGGC AAAGCCCGTT CACCAACTTC ACGTTTGACG TGGTGCCCCC GTCGCATATC GCCAACGAAC CTGTGATCAT CGGCGGCGCT TTCCAGGATT CCACCTACGG CGAATACGCC GAGGAAATGG ACATGATCAA CCGCGCCTTC ATCGAGGTTA TGCTGGAAGG CGATGCGGAC GGACGGATAT TCTCCTTCCC CATTCCCACG TACAACGTGA CCAAGGATTT TCCGTGGGAA TCCGAAACCG GTCAGCTGCT TTTGCAGCTC ACCGCCAAAT ACGGCGTGCC GTATTTCCAG AACTTCATCA ATTCGGACCT CAACCCCGAA GATGTGCGCT CCATGTGCTG CCGACTGCAG ATGGACCTGC GCGAAATACG CAAAAAAACC GGCGGTCTGT TCGGTTCCGG CGACCTTACC GGCTCCATCG GCGTGGTTAC GCTGAACCTG CCCAAGCTGG CGTATCTTGC TCACAATGAA GATGATTTCC TTGATCTGGT GACAGAATAT GCCGAAATGG CCCGCGACTC GCTGGAATAC AAGCGTAAAA TGTGCCAGCA GAACCTTGAT AACGGCATGT TCCCGTTTTC GCGCCGGTAT CTGAAAAACG GCTATGCCGG GCATTTTTCA ACCATCGGCC TCATCGGCGG ACACGAAGCA TGCCTGAACC TGCTGGGCAA AGGCATTGAA AGTGAAGGCG GGCTGCGTCT GATGACCCGC GTGCTTGACC GCCTGCGCGA ACTGGTGCTG CGTTTTCAGG AAGAGACAGG CCATCTGTAC AATCTTGAAG CCACTCCGGG TGAAGGTACC TGCTACCGTC TGGCAAAAAT CGACAAGGAA CTGTACGAAG ATATCCGTAC TTCCGGTGAA AGCGTACCGT ACTACACCAA CTCCACGCTG CTGCCCGTGG GTATTTCCAC CGACGTTTTC TACGCGCTGG ACCACCAGAA CGAGTTGCAG ACCCTGTACA ACGGCGGTAC GGTATTCCAC ACCTTCCTCG GCGAGGCCGT GACCGAGCCG GAGTCGGTGA AAAACTTCCT TGTAAAGGCC ATGACCAACA CCAAACTTCC GTACATCTCG CTCACTCCGA CGTTTTCGGT GTGCAAGGAC CACGGCTACC TGAACGGTGA ACACTTCAAC TGCCCCACCT GCGGGCAGGA TGCAGAAGTG TACACCCGTG TTGTGGGCTA CTACCGCCCC GTCAGCCGCT GGAACAAGGG CAAGCAGGAA GAATACAGAG AACGTGCCGA ATACATGATG CCGTGCTGCG GCAACTAG
|
Protein sequence | MPNHILKRDG RLETWSTDRI AGAIFKSLKA SGIKDPLLSK RLARKVEEKL NDEDTPEQER VQDMVQQVLM EARLYNVAER YIIYREKRRE MRSQGQAYLD ISQMIESYLD RSDWRVNENS NMGHSFQGLI LHMAGSVQAR YVLEKYPEEI RQAHQHGYFH IHDLSFGLAG YCAGWSLRDL LLEGFNLAGR CSSAPAQHFD AACGQIVNFL GTLQNEWAGA QAFNNVDTYL APFVRKDGLT YKQVKQRMQN LVYNLNTTSR WGGQSPFTNF TFDVVPPSHI ANEPVIIGGA FQDSTYGEYA EEMDMINRAF IEVMLEGDAD GRIFSFPIPT YNVTKDFPWE SETGQLLLQL TAKYGVPYFQ NFINSDLNPE DVRSMCCRLQ MDLREIRKKT GGLFGSGDLT GSIGVVTLNL PKLAYLAHNE DDFLDLVTEY AEMARDSLEY KRKMCQQNLD NGMFPFSRRY LKNGYAGHFS TIGLIGGHEA CLNLLGKGIE SEGGLRLMTR VLDRLRELVL RFQEETGHLY NLEATPGEGT CYRLAKIDKE LYEDIRTSGE SVPYYTNSTL LPVGISTDVF YALDHQNELQ TLYNGGTVFH TFLGEAVTEP ESVKNFLVKA MTNTKLPYIS LTPTFSVCKD HGYLNGEHFN CPTCGQDAEV YTRVVGYYRP VSRWNKGKQE EYRERAEYMM PCCGN
|
| |