| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3003 |
|---|
| Symbol | |
|---|
| ID | 3758801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2988666 |
|---|
| End bp | 2990063 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637783909 |
|---|
| Product | two component Fis family transcriptional regulator |
|---|
| Protein accession | YP_389492 |
|---|
| Protein GI | 78358043 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0697126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC GCGTTCTTAT TGTGGATGAC GAAGACGGCA TCCGCTTTTC CCTGCGGGGT
ATTCTGGAAG ATGAAGGCTA TGAGGTAGCG GAGGCGGAAA CCGGTGAAGA AGGCCTGAAA
CTGGCCACGG AAACGCCCCC CGACCTTATA TTTCTGGATA TATGGCTGCC GGGCATGGAC
GGACTGGAAG TGCTGGACAA TCTGCGTACG GCCGATGCCT CTTTGCCGGT GATCATGATT
TCCGGTCACG GCAACATCGA AACCGCGGTC AACGCCATAA AAAAAGGCGC CTACGACTTC
ATCGAAAAAC CCCTCTCGCT GGAAAAAGTC GTCATTTCGG CCAACAAGGC GCTGGAGTAT
TACCGCCTGC GCAGAGAGAA TCAGGCCCTG CGCTCGCGGC TCACCCAGTC GACCACCGTG
GAAATGACCG GAAACTCCGC TTCCATTGTG GAACTGCGCG GCCAGATAGG CCGGGTGGCC
CCCACGGACG CATGGGTGCT CATCACGGGA GAAAACGGCA CGGGCAAGGA AATAGCGGCA
CGCTCCATTC ACGCAAGCTC GCGCAGAAAA GATAAACCGC TGGTGGCGGT CAACTGCGCC
GCCATACCCG AAGAGCTTAT CGAAAGCGAA CTCTTCGGAC ACGAAAAAGG CGCCTTCACC
GGTGCCGAAA CTGCCAAGAC CGGCAAATTT GAAATGGCTC ATCAGGGCAC GCTGTTTCTG
GACGAAATTG CAGACATGAG CCTGAAAACG CAGGCAAAGA TTCTGCGTAT TCTGCAGGAG
CAGAGCTTTG AGCGGGTGGG CGGCCATAAA ACGGTAAAGG TCGATGTGCG CGTTATCGCG
GCAACCAATA AAAGTCTGGA AGATGAAATA GCCGCAGGCC GGTTCCGCGA AGACCTGTAT
TACCGCCTGC GGGTCATCCC CCTTGTGGTG CCGCCGCTGC GCCAGCGCGG CGATGACGTT
ATGCTGCTCA TCGGTGAATT CATGAACAGA ATGACCGCGG AACACGGTTT CCGCCCTGTC
ACGTTTGCAC CGGATGCGTG TTCCGCCCTG CTGTGCTACC ACTGGCCGGG CAACGTGCGT
GAACTGAAAA ATTTTGTGGA ACGCATGCTC ATCATGCACT CCGGCCAGAC GGTGACCGCC
GCCATGCTGC CGCCCGAATA CCGCTGCGCC GGTGCGGGCA TAATGCCTCA GCCCTGTACC
GCAGGCCCGT CGGATGGTAT GATCCCCGAA GGTGTCATGG ATTTCAAGGC GGCGCGCACT
GCCTTCGAGG CCCGCTTTCT GGAGGCGAAA CTGCAGGAGT TCGGCGGCAA CATAACCCGC
CTGGCCGAAG CCATCGGCCT TGAACGCAGC TACCTGTACC GCAAACTGAA ATCATACAAC
ATTCAGACTC CGGAGTAG
|
|---|
| Protein sequence | MNARVLIVDD EDGIRFSLRG ILEDEGYEVA EAETGEEGLK LATETPPDLI FLDIWLPGMD
GLEVLDNLRT ADASLPVIMI SGHGNIETAV NAIKKGAYDF IEKPLSLEKV VISANKALEY
YRLRRENQAL RSRLTQSTTV EMTGNSASIV ELRGQIGRVA PTDAWVLITG ENGTGKEIAA
RSIHASSRRK DKPLVAVNCA AIPEELIESE LFGHEKGAFT GAETAKTGKF EMAHQGTLFL
DEIADMSLKT QAKILRILQE QSFERVGGHK TVKVDVRVIA ATNKSLEDEI AAGRFREDLY
YRLRVIPLVV PPLRQRGDDV MLLIGEFMNR MTAEHGFRPV TFAPDACSAL LCYHWPGNVR
ELKNFVERML IMHSGQTVTA AMLPPEYRCA GAGIMPQPCT AGPSDGMIPE GVMDFKAART
AFEARFLEAK LQEFGGNITR LAEAIGLERS YLYRKLKSYN IQTPE
|
|---|
| |