| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2965 |
|---|
| Symbol | |
|---|
| ID | 3757970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2948110 |
|---|
| End bp | 2949390 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637783866 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_389454 |
|---|
| Protein GI | 78358005 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.322465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC ATATTTCCGG CACACTGTTT GTTTCGGGCG CGCTTCTTTC CGGGCGCACG
GTTGATGTCA CCGTATCGGG CGGACGCATT GCCGCCGTCA GCGAACACGG GGCGGCCCCC
GCGCCGCAGC ACGCCGAAAC TGTGGAAGCC GCGGGCAAGA TACTGTTTCC CAGTTTTATT
GACTGCCACG TGCACCTGCG CGAACCCGGT TTTGAGTACA AGGAAGACAT TGCCTCCGGA
CTCGCAGCCG CTGCGCACGG CGGATTCGGG GCGGTACTGC CCATGGCCAA TACCAGTCCC
GTCAACGATC AGGGCAGTGT GACCGAGCTG ATGCTGGAAC GCGCCCGCAA GGCATGGCCC
CACGGCCCGC GCGTGCATCC TGTGGGTGCC GCCACCAAAG GACTGAAAGG CGAAGAACTG
GCCCCCATGG GCGAACTGGC CGCCGCGGGC TGCGTCGCCT TTTCCAACGA CGGACTGCCG
GTGGGCGGTG CCGAAATGTT CCGCCGCTGC ATGGAATACG CCGCAGACTT CGGTAAAATA
GTCATCGATC ACTGCGAAGA TCCTTCACTG GCGCGCGGCA CACACATGAA CGAAGGGGTG
ACCAGCGGAC GCCTGGGAGT CAAAGGACAG TCGGTGGTGG CCGAATCGGT ACAGGTGGCC
CGCGACATTC TGCTGGCCGA ATATCTGGGC ATTCCGGTCC ATCTGGCACA TATCAGCTGC
CGTCAGTCCG TGGAGCTTAT CGCGTGGGCC AAGCAGCGCG GCGTAAGAGT AACGGCCGAA
ACCTGCCCGC ACTATCTGCT GCTGGACGAT CTGGCACTGG AACAGTACTC CACAGCAGCC
AAGGTCAACC CGCCGCTGCG CACCCCCGAC GACGTGGCGG CCATGCGCCG TGCCGTGGCT
GACGGCACCA TAGACATACT GGTGACAGAC CACGCCCCGC ATGCCGCGCA CGAAAAGGAT
ACCCCGCTGG ATGAAGCGCC CAACGGCATT TCCGGTCTGG ATACGGCGGT GGCTCTGACA
TGGCGTCTGG TGCAGGAAGG CCTGCTGACC GAAGCCGACA TGGTGCGCCT GTGGTGCCAT
GCTCCGGGCA GCCTGTTCCG TCTGCCGGTA AACCGCTTCA CGGCGGGCGA CCCTGCAGAT
TTTTTCCTGT TCGACCCTGC GCATGAATGG ACTGTGACCC CTGAGGCGAT GCATTCAAAA
GGCAAAAACA CGCCCTTTAC CGGGTGGAAG CTTACCGGTA AGGTGACATC CCACTGGATG
GGCGGTCACA GAATAGCATG A
|
|---|
| Protein sequence | MSDHISGTLF VSGALLSGRT VDVTVSGGRI AAVSEHGAAP APQHAETVEA AGKILFPSFI
DCHVHLREPG FEYKEDIASG LAAAAHGGFG AVLPMANTSP VNDQGSVTEL MLERARKAWP
HGPRVHPVGA ATKGLKGEEL APMGELAAAG CVAFSNDGLP VGGAEMFRRC MEYAADFGKI
VIDHCEDPSL ARGTHMNEGV TSGRLGVKGQ SVVAESVQVA RDILLAEYLG IPVHLAHISC
RQSVELIAWA KQRGVRVTAE TCPHYLLLDD LALEQYSTAA KVNPPLRTPD DVAAMRRAVA
DGTIDILVTD HAPHAAHEKD TPLDEAPNGI SGLDTAVALT WRLVQEGLLT EADMVRLWCH
APGSLFRLPV NRFTAGDPAD FFLFDPAHEW TVTPEAMHSK GKNTPFTGWK LTGKVTSHWM
GGHRIA
|
|---|
| |