Gene Dde_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2957 
Symbol 
ID3757962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2937460 
End bp2938230 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content57% 
IMG OID637783858 
Productputative GTP cyclohydrolase 
Protein accessionYP_389446 
Protein GI78357997 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.133521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACG TACAGAACAG CCCTTCGCAG GTTCCTCTCG CCATTGACAC CGTGGGTGTA 
AAAAGCCTGC ATCTGCCGCT CATTGTCAGC GACAGGGCCA ACGGACACCA GCATACCGTG
GCCGTGGTGG ATATCGGGGT CGAGCTGCCG GCACGTTTCA AGGGCACCCA TATGAGCCGC
TTTGTCGAAG CGCTGGCTCA CTGGGACGAA CACCTGAACT ACCGTACCAT CAAAAGCCTG
CTGGAAGATG TGAAAACGCG GCTGCAGGCC AGAAAAGCCC ATGTGCATTT CCGTTTTCCC
TACTTCATCG CCAAAAAAGC ACCGGCAACC GGCAGCCCCG GGCTTGTAAG CTACAACTGC
TGCCTTACGG GTGAACTGGC CGACGGCAGA CCCGCCATGA TGCTTGATGT GGAAGTGCCT
GTCATGACGG TTTGCCCCTG CTCAAAAGCC ATAAGCGACG AAGGCGCCCA CAGCCAGCGT
GCACTGGTGC GCATCTCGCT GCGCATGAAG GAATTCTGCT GGCTGGAAGA ATTCATCGAA
CTGGCGGAAC GCTCCGCCTC TTCGCCGGTG TATACGCTGC TTAAACGCGA AGATGAAAAG
TTCGTCACCG AAGACGCATT CGCCCATCCC ACTTTTGTGG AAGACGTGGT GCGCGCTGCG
GCCCAGCAGC TGGAAGCCCA TCCCAGTGTG TCGTGGTTCC GGGTCGAGGT GGAAAGCATA
GAATCCATAC ACAACCACAG CGCATTCGCC CGTATTGAAA AACACAAATA G
 
Protein sequence
MEDVQNSPSQ VPLAIDTVGV KSLHLPLIVS DRANGHQHTV AVVDIGVELP ARFKGTHMSR 
FVEALAHWDE HLNYRTIKSL LEDVKTRLQA RKAHVHFRFP YFIAKKAPAT GSPGLVSYNC
CLTGELADGR PAMMLDVEVP VMTVCPCSKA ISDEGAHSQR ALVRISLRMK EFCWLEEFIE
LAERSASSPV YTLLKREDEK FVTEDAFAHP TFVEDVVRAA AQQLEAHPSV SWFRVEVESI
ESIHNHSAFA RIEKHK