Gene Dde_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2687 
Symbol 
ID3757710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2693625 
End bp2694758 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content55% 
IMG OID637783589 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_389178 
Protein GI78357729 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCTG AAACACACTT TGCCCCCGCA CGACGCAGTA CATTGCCGGA GCTTGCACGC 
CAGCGCAGGC TTTTTGCAGA TGAAACACTG GTCACACTGC TCGATTCAGT AACGGATATT
GTCGTTATTC TTAATGATAC AAGACAGATT GTTTTTGCAA ACCGCAATCT GTTGTCTCTG
CTGGGTGAAA AAACTGCAGA CAGGGTGATA GGCATGCGCC CGGGCGAACT GTTTTCGTGC
GAACACGCCT GCTGCACTGC GGCCGGATGC GGCACCTCGC CCGCATGCCA CAGCTGTGAA
GCCGTGCACG CCATACTGTG CGGACTGAGC GGCAGACGCC GTGAAGCGGA ATGCCGCATC
ACCAAGCGCG AAGATGAAGT GCTGGTGGCC TATGACCTGA AAATCTGCGC TTCACCGCTT
ACTGTGCACG ATGAGCATTT TGTATTGTTC GCCATCCACG ATATCAGCGA CGAAAAAAGA
CGCCGGGCAC TGGAGCGGAT TTTCTTCCAT GACATACTGA ATACGGCAGG CGGACTGCAG
AACCTTGCGC AGATGATTCT TGAAGAGGTT CCGCTGGACC TGAAGGGTGA AAGTCTGCTT
ATGCATCGCT TTTCCAAAGA ACTGGTAGAC GAGATCATGG CTCAGCGTCT GCTTCTGGCC
GCAGAATCGG ATGAACTGAG TATCCGCCCC GCACGGTTGT GTCTGGCTGA ACTGATGAGT
GATGTGCTGG AATCGGTACA GCAGATGGAA ATGGCCCAAG GGGTGCATTT CGACGTGCAG
GCACCGGCGG AAAGTCTGAT GATAGAAAGC GATCAGACCT TGTTGCGCCG TGTCATGCTG
AACATGCTGA AAAACGCCAT GGAAGCCTCG CCGCAGGACG GTTGCGTGGC GGTGGGCTGC
TGTCCGGCAG ACGGCGGCGC AGAATTTTAC ACCAGAAACG ACTGCGTCAT ACCAGAGGCA
CATCGGTGGC TTGTATTCCA GCGTTCTTTT TCTACAAAGG GAACGGGGCG CGGGCTTGGC
ACATACAGCA TGAAGCTGCT TACCAACAAC TATCTCAAAG GTTCCGTAGG ATTTGAAAGC
CGCGAGGGTG AAGGCACCAC ATTCCGCCTG TGGCTTCCCG CGGTGCTGAG CTGA
 
Protein sequence
MPAETHFAPA RRSTLPELAR QRRLFADETL VTLLDSVTDI VVILNDTRQI VFANRNLLSL 
LGEKTADRVI GMRPGELFSC EHACCTAAGC GTSPACHSCE AVHAILCGLS GRRREAECRI
TKREDEVLVA YDLKICASPL TVHDEHFVLF AIHDISDEKR RRALERIFFH DILNTAGGLQ
NLAQMILEEV PLDLKGESLL MHRFSKELVD EIMAQRLLLA AESDELSIRP ARLCLAELMS
DVLESVQQME MAQGVHFDVQ APAESLMIES DQTLLRRVML NMLKNAMEAS PQDGCVAVGC
CPADGGAEFY TRNDCVIPEA HRWLVFQRSF STKGTGRGLG TYSMKLLTNN YLKGSVGFES
REGEGTTFRL WLPAVLS