Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2601 |
Symbol | |
ID | 3757623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2620228 |
End bp | 2620929 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637783502 |
Product | membrane protein, putaive |
Protein accession | YP_389092 |
Protein GI | 78357643 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0232013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGAGAA CCGCCCAGCG CAGCCAGAGC CGTACTGAAG TCGTCAATGC CTTCATGCGC GGCGTGTACC AGTGGATGGC GGCAGGACTG GCCGTAACAG CCGTATCCGC TTTTGCGGTG GCCAGCAGCC CCGCGCTGCT GCAGCTTATT TTCGGCACCC CCATGCTGCC TCTTGTGCTT ATGATCGGCC TTGTGGGGCT GGTGTTTTAT ATGTCGGCCC GCATCGGCAC CATGTCTGCA GGCACGGCAA CCACGCTGTT TATGGTGTAC AGCGCGCTGA ACGGCGTTGT GCTCTCCAGC GTGCTCATTG TTTATGCCAC AGCTTCGGTT TTTCAGGCTT TTGTCACCGC GGCGGCCATG TTCGGCGCCA TGACGGTGTA TGGCATGACC ACCAAACGCG ACCTTACATC CATGGGCAGC TTCATGTTCA TGGGGCTTAT CGGTATTCTT ATCGCCTCGG TGGTTAATAT CTTCCTCGGC AGCTCCATGA TGGAGCTGGT TATCAGCGCC ATCGGCGTCA TTGTGTTTAC CGGGCTTACC GCGTACGATA GCCAGCAGCT GCGCCAGATG GGTGAAACCG CTCCCATGGA TGATCCGGTG GCCATACGCC GCGGAACCAT TCTTGGCGCG TTGCGGTTGT ACCTTGATTT TATCAACCTG TTCCTGATGC TTCTCAGGCT CTTCGGCGGA GCACGGGATT AA
|
Protein sequence | MLRTAQRSQS RTEVVNAFMR GVYQWMAAGL AVTAVSAFAV ASSPALLQLI FGTPMLPLVL MIGLVGLVFY MSARIGTMSA GTATTLFMVY SALNGVVLSS VLIVYATASV FQAFVTAAAM FGAMTVYGMT TKRDLTSMGS FMFMGLIGIL IASVVNIFLG SSMMELVISA IGVIVFTGLT AYDSQQLRQM GETAPMDDPV AIRRGTILGA LRLYLDFINL FLMLLRLFGG ARD
|
| |