| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2518 |
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| Symbol | |
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| ID | 3757535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2538309 |
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| End bp | 2540564 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637783415 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_389010 |
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| Protein GI | 78357561 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00063624 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAC TGCTTCCATT CCAGATGCGG CTATTTTTTA TGAAAAAACA CTTTTTTCCG
GTAATCATGG GGCTGGTCAG CCTCATCGCC TTTGTGGCAG CCATGGCGGG GTTCGATTTC
ACCACCGCCT CGGAATACGC TGCGCAGTTC AGCCGGCAGC AGGCTCTGCA GGTGCGCGTG
GCAACCAACG CCATAGAAGA CCAGCTGGAC ATGATTTCCG CATCCGGCGC ATCACTTGCT
GGGCATGCCC GCTTTGCCAT CGACTACGGT GCCACATACC AGGCAAAGCT GCTCAGCGCG
CACATCACAA GACAGCCGAA CATCCTTGCT TATGTTCTTA TGGATACCCC GCACAGCCTT
AAAAGCGTGG AGCTGGCTTC CGTCCCGCTT TCCATGGAAG CCGCGGCATA CGCGCAGGAA
TGGATAACGC AAAACTGGAG CAACGCCCCA GAACAACTGG CCGGCAACCT GCTCAAAGCT
CCCCTGCACA TCACCCCCGA ACACCAGCTT GCAGGACTGC TTTATCCTTT TTCGGACGGC
AAAAAGCTGC TGGGCATGTC TGCCACGGTT GTCAGCCTCA CACGGATAAT CAAGCGGTAT
GTGGCCGACC TGCATGTGGA CAACATAGGG CAAGGCTACC TGCTGGCGGA TGACGGCACA
CTGCTTTTCG ACCCTGACAG CAACAACATC GGTAAAAACA TATTTACCCA TATCTATGAA
AACGCACCGG AACGGATGCA TGTTTTCCGG GAAGTGCTGG CAGCCAGATC CGGCAGCGGC
ATCTTTGACT TTCCCGACAC GGAAAACAGC AAAGCCCAGC AGATGCTGCT GGCGTGGGAC
ACGGTCGATT TCGCAGGACG CAGGCTCAAG GTCTGTCTGG CCGTATCGGG CGATACCGTC
AACGAGGTAA TGCAGCGTCA GGCCCGCTGG CGCATCGCCG CGGGGGTACT GTTTCTGGTG
GGGCTGGTGC TGGCAAGCAC ACTCATCATC TACCGGTCGG GGCTTGCCAA AGTGCGGGAA
AATGAAGAGC GCCTGCAGAT GGCTCTTACC GGCAATCAGG ACGGGCTGTG GGACTGGAAC
ATACCGGACG GCAGAGTTTA CTATTCTCCC CGCTGGAAAG AAATAATGGG ACTTGAAACC
GACCAGCAGC TGTCATCGCC CGAAGAATGG TCATCGCGCA TTCACCGCGC CGACAAAGAA
GAGGTGACAG CCCACCTGCA GGAGCATCTG CGGGGCGGTG TCCCTTACTT TCAGACAGAG
CACCGTGCGG TGCGCGCCGA CGGGGCTGTC ATCTGGGTGC TGGAACGCGG AGCCGTCATA
AGCCACGACC GCGAAGGGAA ACCCGCCCGT CTGGTAGGCA CCACCACCGA TGTAACAGCG
CGGCGGCAGG CCATGATGGA ACGCGACATG CTGTTCCGCA ACTCCATAGA CCTGCTGGCC
ATCACGGATG TTGAAGGCAA CATACTTGAA GCCAATCCGG CATGGGAAAA CATGCTGGGC
TGGACCGCTG AAGAGCTGCG CCTGCCGCCC TGTTTCGATT ATGTGCACCC CGATGATGTA
CCCAAGGCTG CGGAAAATTT TGCTTTGCTG ATGAAAGGCA TTCCCGTACG GGCGCATGAA
GGCCGTTTTT TAAAAAAAGA AGGCAGCTGG ATTTGGCTTT CGTGGAACGT GCTGCCCGAC
ATGCAGCACC GGCGCATCTA TGTAACCGCA CGTGACATCA GCAGGCAGAA GGCACACGAG
CGCAGGCTGC ATGAACAGGC ATCCACGGAC GAGTTGACAG GCATATTCAA CCGACGCCGC
GTACTGGACA TCGGCAAAGC CGAAATGGCC CGTTCACGGC GCTTCGGACG CCCGCTGGCA
TGCCTCATGA TAGACATAGA CCACTTTAAA CAGATCAATG ACACATACGG ACACGTGGCG
GGTGATGCCG TGCTGCGGGG GGTCACGGCC ACGCTTTCGG CCGGCCTGCG CCAGAGCGAT
ACGCTGGGCC GGCTGGGGGG CGAAGAGTTC ATTGTCTTCA TGCCCGAAAC AGATGCCGAG
GGGGCAATGC ATACAGCGGA AAGGCTGCGG CAGGCCGTGG AACAGAGTTC GGTGCTGATG
GACGGCGAAG GAGCCAGTCC CGGCATTACC GTCAGTCTGG GCGTAACCGT GCTGGCGCCG
GAAACGGCAT CGCTGGATGC ATTCATTGCT GCCGCCGATG CAGCCCTGTA CCGTGCCAAG
GAAAACGGAA GAAACAGAGT CGAATTTCAG AAATGA
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| Protein sequence | MTALLPFQMR LFFMKKHFFP VIMGLVSLIA FVAAMAGFDF TTASEYAAQF SRQQALQVRV
ATNAIEDQLD MISASGASLA GHARFAIDYG ATYQAKLLSA HITRQPNILA YVLMDTPHSL
KSVELASVPL SMEAAAYAQE WITQNWSNAP EQLAGNLLKA PLHITPEHQL AGLLYPFSDG
KKLLGMSATV VSLTRIIKRY VADLHVDNIG QGYLLADDGT LLFDPDSNNI GKNIFTHIYE
NAPERMHVFR EVLAARSGSG IFDFPDTENS KAQQMLLAWD TVDFAGRRLK VCLAVSGDTV
NEVMQRQARW RIAAGVLFLV GLVLASTLII YRSGLAKVRE NEERLQMALT GNQDGLWDWN
IPDGRVYYSP RWKEIMGLET DQQLSSPEEW SSRIHRADKE EVTAHLQEHL RGGVPYFQTE
HRAVRADGAV IWVLERGAVI SHDREGKPAR LVGTTTDVTA RRQAMMERDM LFRNSIDLLA
ITDVEGNILE ANPAWENMLG WTAEELRLPP CFDYVHPDDV PKAAENFALL MKGIPVRAHE
GRFLKKEGSW IWLSWNVLPD MQHRRIYVTA RDISRQKAHE RRLHEQASTD ELTGIFNRRR
VLDIGKAEMA RSRRFGRPLA CLMIDIDHFK QINDTYGHVA GDAVLRGVTA TLSAGLRQSD
TLGRLGGEEF IVFMPETDAE GAMHTAERLR QAVEQSSVLM DGEGASPGIT VSLGVTVLAP
ETASLDAFIA AADAALYRAK ENGRNRVEFQ K
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