Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2497 |
Symbol | |
ID | 3757514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2520378 |
End bp | 2521433 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637783394 |
Product | hypothetical protein |
Protein accession | YP_388989 |
Protein GI | 78357540 |
COG category | [R] General function prediction only |
COG ID | [COG3943] Virulence protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0074171 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGGA AGAAAGCAGG CAAGGAAGTC TCCATCGTTC GCTCCTCGGC GGCGGAATAC CTGACTTTTG TCGCCGCCAG CGGTAGTGGC GGCGTAGAAG CCGTTTATGC CGACGAAAGC ATCTGGCTGA CCCAAAAGAT GATGGGTGTG CTTTACGATG TTGAGACCCA CACGATCAAC TACCACCTGA AAAAGGTGTT TTCAGACAGC GAGTTGCAGG AGGATTCAGT TATTCGAAAT TTTCGAATAA CTGCTGCCGA CGGCAAGACC TACAACACCA AACACTACAA ACTGCCCGCA ATCATCGCCG TGGGCTACAA GGTGAACTCC GAGCGCGCCG TGCAGTTCCG CAAGTGGGCT ACGACCATCA TCGACGAGTA CACCATCAAG GCCTACGTGA TGGACGACGA GCGCATCAAG GCTGGCGGTT CTATCCTGAC GGAACAATAT TTTGAAGAGC AGTTGCAGCG CGTCCGCGAG ATCCGTCTCT CCGAGCGCAA GTTCTACCAG AAGATCACCG ACATCTACGC CACCGCCATC GACTACGACG TCACCGCCCA GGCCACCAGG CGCTTTTTCG CCAACGTGCA GAACAAACTC CACTGGGCCA TTCACGGGCA GACCGCGGCA GAGGTCATTG TCAACCGTGC CGATTCCGAG AAGCAGCACA TGGGGCTGAC CACCTGGAAG GATGCTCCGC AAGGGAAAAT CCAGAAGTTT GACGTCAGCG TGGCCAAAAA CTACCTAACC GAAGAGGAAA TGGCTCAACT GTCTCGACTG GTCAATGCCT ACCTGGATGT AGCTGAGGAC ATGGCCCTGC GCAAAATGCC CATGACCATG CAGGACTGGG AGACCCGCTT GAATAAGTTT ATTGAAGCTA CCGACCGGGA AATCCTCCAG GATGCGGGCA AAGTCACGGC AGAGATCGCC AAAGCCCACG CCGAAAGCGA GTTTGAGAAA TACCGTATCG TTCAGGACCG GCTGTTTGAG AGCGATTTCG ACCGGATGCT GAAACAGATC GAAGCCGTTC AGAAACCGGG AGGCGATGAT GAATAA
|
Protein sequence | MSRKKAGKEV SIVRSSAAEY LTFVAASGSG GVEAVYADES IWLTQKMMGV LYDVETHTIN YHLKKVFSDS ELQEDSVIRN FRITAADGKT YNTKHYKLPA IIAVGYKVNS ERAVQFRKWA TTIIDEYTIK AYVMDDERIK AGGSILTEQY FEEQLQRVRE IRLSERKFYQ KITDIYATAI DYDVTAQATR RFFANVQNKL HWAIHGQTAA EVIVNRADSE KQHMGLTTWK DAPQGKIQKF DVSVAKNYLT EEEMAQLSRL VNAYLDVAED MALRKMPMTM QDWETRLNKF IEATDREILQ DAGKVTAEIA KAHAESEFEK YRIVQDRLFE SDFDRMLKQI EAVQKPGGDD E
|
| |