Gene Dde_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2493 
Symbol 
ID3757510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2513202 
End bp2515601 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content60% 
IMG OID637783390 
ProductDEAD/DEAH box helicase-like 
Protein accessionYP_388985 
Protein GI78357536 
COG category[S] Function unknown 
COG ID[COG4951] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATCGG ATGGCGAACA AGAAGAACTG CGTCAACTGC GCGAGGAGAA CGCCCGCCTC 
AAGAAACTGC TGACCCAGCA CGGTATCGCC TGGGAAGAAC CGGCCATCCC TGAACTCGTC
CCCAACCCAA CCGAATCCGC ACCAGTCCCA ACTCACTTTA CCACCGACGA CAAGATCGCC
CTGTTCCGCC GCCTTTTTCG TGGGCGAGAG GATGTCTACC CCCAACGCTG GGAATCGGCC
AAGGGAACGT CCGGCTATTC ACCAGCCTGC GGTAACGAGT GGAAACCCGG CATCTGCCAC
AAGCCCCGGG TGAAATGCGG CGATTGCAAC CAGCGCCAAT TGCTGCCCGT GACCGATCAG
GTGATTTATG ACCATTTGGC AGGAAAACAG ACCATCGGCG TTTATCCACT CCTGAGCGAT
GACAGCTGCT ACTTCCTGGC GGCTGACTTC GATGAGGCCG ACTGGCGGGA GGATGCCAGG
GCCTTCATGC AATCCTGCCG GGAGCTTGCT ATCCCGGCGG CGCTGGAGAT TTCACGCTCC
GGAAACGGCG CTCACGCCTG GATCTTTTTT GCCGAGCCGG TTCCGGCCCG GGAGGCCCGT
CAGCTCGGGG CCGCACTGAT CAGCCATACC TGCGACCGCA CCAGGCAATT GTCCCTGACC
AGCTACGACC GGCTGTTTCC CAACCAGGAC ACCATGCCCA AGGGCGGCTT CGGCAACCTG
ATTGCGCTGC CCCTGCAGAA ACAGCCGAGG GAATTAGGGC GCAGCATCTT CGTTGATGAA
CACCTGCAAC CTTATCCCGA TCAATGGGCT TTTCTGGCAT CCATCCGTCC CATGTCACGG
CGGGACCTGG AAGACGCCAT TTTGCGGGCC AGCGGCGGCC GCCATCCCCT GGATGTGGCC
TTTGCCACAG AGGAGGAAGA CAGCAAGCCA TGGCAGAGAC CATCACCTGT ACCCGCCCGG
ATTAACGGTC CACTGCCTGA TTCTCTGACC CTGGTGCTAG CCAACCAGAT TTTCATCGCC
AAGGCCGATC TGCCGCAGTC GTTGGCTAAC CGCCTGATCC GTCTCGCCGC CTTTCAAAAT
CCGGAGTTCT ACAAGGCCCA GGCCATGCGC CTGCCGGTAT GGAACAAGCC GCGCATCATC
GGCTGCGCCG AGAACTACTC CCAGCATATC GGCCTGCCAC GAGGCTGCCT AGATGCGGTG
CTCGACTTGT TGCGGGAGAA CGACATCCGT CCGGAGCTGC AGGACGAACG ATTTTTCGGA
CGGAGAGTGA CGGCCAAGTT CACCGGCACC TTGCGCAAGG ACCAGAAAGC GGCGGTGCGG
GAGATGCTCA AGCACGAGGT CGGCGTGCTC TGCGCCCCGA CGGCCTTCGG CAAAACCGTT
ACCGCAGCCG CCCTGATCGC CCGGCGCAAG GTGAGTACAC TGGTGCTGGT GCATCGCACC
GAACTGCTGC GCCAGTGGCA GGAGCGGTTG ACCGGATTTC TTGAGTCCCC GAAAGGAAGC
TTGGGTGTCA TCGGCGGCGG CAAGAAGAAA CCATCAGGCA AGATCGATAT TGCCGTCATG
CAGTCGCTTT CCCGTCGGGA AGATCTTGGC GAGCTGCTCG ACCAGTACGG GCAGATCATT
ATCGACGAAT GCCACCACCT GTCGGCGTTT TCCTTCGAGG CAATCCTCAA ACAGGCAAAG
GCGAAATTCG TGGTGGGCCT GACCGCCACC CCGATACGAC GCGACGGGCA TCAGCCGATC
ATCTTCATGC AGTGCGGGCC GATCCGCCAT AGTGCCGCCA GGCCGGAAAC CGCCCCGGCG
CAACTGGAGG TCTGGCCGAA GGTGCTGCCA GCGCCGGTGA TCCCACCAGA TTCACCGATT
CAGGATGTAT TCCGCATTCT TGCCAACGAT GCGACCCGCA ACCGTCGCAT TGCCGGAGAT
GTACTGGCCG CCTATCGGGA AGGGCGAAAG GTGCTTGTGC TTACCGAGCG AACGGATCAT
TTGCCGCTGT TGCAGGAGGC GCTGGGAGAT GAGGTCGAGC ACTGCTTTGT CCTGCATGGC
CGCTTGTCGA AGAAGCAGCG AACGGCGGTG TTCGCGGAAC TGGATGCATT GGATGAGTCG
GCCCCGAGAG TGTTACTCGC CACCGGCCGC CTGATCGGCG AAGGCTTCGA TCATCCACCG
CTCGACACCC TGATGCTGGC CATGCCAATT TCCTGGAAGG GAACCTTGCA GCAGTACGCC
GGACGTCTGC ACCGGGAGCA TGCCGATAAG CAGGATGTGC GCATCTACGA CTATGCCGAG
ACCGATCAGC CCCAACTCAA CCGCATGTGG GACAAACGCC AGCGCGGCTA TAGGGCCATG
GGGTACGAGA TCAAACCGAT GGAGACCGTA GTTTTAGGAA GCGGCACGAA CCTAAAATAA
 
Protein sequence
MVSDGEQEEL RQLREENARL KKLLTQHGIA WEEPAIPELV PNPTESAPVP THFTTDDKIA 
LFRRLFRGRE DVYPQRWESA KGTSGYSPAC GNEWKPGICH KPRVKCGDCN QRQLLPVTDQ
VIYDHLAGKQ TIGVYPLLSD DSCYFLAADF DEADWREDAR AFMQSCRELA IPAALEISRS
GNGAHAWIFF AEPVPAREAR QLGAALISHT CDRTRQLSLT SYDRLFPNQD TMPKGGFGNL
IALPLQKQPR ELGRSIFVDE HLQPYPDQWA FLASIRPMSR RDLEDAILRA SGGRHPLDVA
FATEEEDSKP WQRPSPVPAR INGPLPDSLT LVLANQIFIA KADLPQSLAN RLIRLAAFQN
PEFYKAQAMR LPVWNKPRII GCAENYSQHI GLPRGCLDAV LDLLRENDIR PELQDERFFG
RRVTAKFTGT LRKDQKAAVR EMLKHEVGVL CAPTAFGKTV TAAALIARRK VSTLVLVHRT
ELLRQWQERL TGFLESPKGS LGVIGGGKKK PSGKIDIAVM QSLSRREDLG ELLDQYGQII
IDECHHLSAF SFEAILKQAK AKFVVGLTAT PIRRDGHQPI IFMQCGPIRH SAARPETAPA
QLEVWPKVLP APVIPPDSPI QDVFRILAND ATRNRRIAGD VLAAYREGRK VLVLTERTDH
LPLLQEALGD EVEHCFVLHG RLSKKQRTAV FAELDALDES APRVLLATGR LIGEGFDHPP
LDTLMLAMPI SWKGTLQQYA GRLHREHADK QDVRIYDYAE TDQPQLNRMW DKRQRGYRAM
GYEIKPMETV VLGSGTNLK