Gene Dde_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2438 
Symbol 
ID3757454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2458725 
End bp2459189 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content58% 
IMG OID637783334 
Producttranscription antitermination factor NusB 
Protein accessionYP_388930 
Protein GI78357481 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.841246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCAA AAGGTAACAA TTCATCGCGG CGCTCTTCGC GGGCGCTTGC TTTTCAGGTT 
CTTTACGGGC TTAACTTTTC GCCCGCCAAG GATCTGGCCC AGCTGCAGGA AGCCTACTGT
GCATCGCCCG ACGTGAGCGA CCGCGGAGGC GAAGCGCACC CCGTGGGGTT TGCCTGGGAA
CTTATCGAAG GCACATGGAC CAATCAGAAA GCGCTGGACG AGATCATCAC CCGTTTTGCC
CAGAACTGGC GCGTGGAGCG CATCGGCAAA ATAGAACTGA CCATCCTGCG CCTTGCCGTA
TATGAAATGC TCTACCGCGC CGACGTACCG CCCAAAGTGG CCATCAACGA AGGCATAGAG
CTTTCAAAGC AGTTCGGCGA CGACAAGTCG CGCAACTTCA TCAACGGCAT ACTGGATGCG
GCAGCCAAGG CGCTGGAAGC AGGCACCATC ACGTGCAAGT ACTGA
 
Protein sequence
MAAKGNNSSR RSSRALAFQV LYGLNFSPAK DLAQLQEAYC ASPDVSDRGG EAHPVGFAWE 
LIEGTWTNQK ALDEIITRFA QNWRVERIGK IELTILRLAV YEMLYRADVP PKVAINEGIE
LSKQFGDDKS RNFINGILDA AAKALEAGTI TCKY