Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2438 |
Symbol | |
ID | 3757454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2458725 |
End bp | 2459189 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637783334 |
Product | transcription antitermination factor NusB |
Protein accession | YP_388930 |
Protein GI | 78357481 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.841246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCAA AAGGTAACAA TTCATCGCGG CGCTCTTCGC GGGCGCTTGC TTTTCAGGTT CTTTACGGGC TTAACTTTTC GCCCGCCAAG GATCTGGCCC AGCTGCAGGA AGCCTACTGT GCATCGCCCG ACGTGAGCGA CCGCGGAGGC GAAGCGCACC CCGTGGGGTT TGCCTGGGAA CTTATCGAAG GCACATGGAC CAATCAGAAA GCGCTGGACG AGATCATCAC CCGTTTTGCC CAGAACTGGC GCGTGGAGCG CATCGGCAAA ATAGAACTGA CCATCCTGCG CCTTGCCGTA TATGAAATGC TCTACCGCGC CGACGTACCG CCCAAAGTGG CCATCAACGA AGGCATAGAG CTTTCAAAGC AGTTCGGCGA CGACAAGTCG CGCAACTTCA TCAACGGCAT ACTGGATGCG GCAGCCAAGG CGCTGGAAGC AGGCACCATC ACGTGCAAGT ACTGA
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Protein sequence | MAAKGNNSSR RSSRALAFQV LYGLNFSPAK DLAQLQEAYC ASPDVSDRGG EAHPVGFAWE LIEGTWTNQK ALDEIITRFA QNWRVERIGK IELTILRLAV YEMLYRADVP PKVAINEGIE LSKQFGDDKS RNFINGILDA AAKALEAGTI TCKY
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