Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2411 |
Symbol | |
ID | 3757427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2430099 |
End bp | 2432522 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637783307 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_388903 |
Protein GI | 78357454 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00900461 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA AAGTGACACT CTCGACAAAA TTCTACTCCG GCAGCATCGG GGTTCTGGTG CTGGCCATTA CACTGCTGTG CAGTGTGACC ATGTGGCTTG TGAGTGACGG CATGACGCAA CTGGGCACAG CCACACTGCA GTCGACCACT GAAAATCTGG TTACCACCAT AGAAATGCAG GACGCCATCA CACAGGAAAA GGTAAGCTCC GACCTCAGTG TGCTTGAACG CGAAATGCAG GGCTACGGTT CGCTGATGCT GAGCGATCTG CATGCGCACC AGACCCGTAT GGTCAATCAG GTCACCAAGG AAGCCGCCAC CGCAACCATA CCCGCACTGG TGCTTACCTC AGACGAAGGT ATGACCCCGT TGTATGAAAA CTTTGAAATA GTGGACAGAG TGCAGAAGCT CATCGGCGGC ACGGCCACTA TTTTTCAGGT GCTGCCCGGC AAACTGCTGC GCATATCGAC CAACGTGCTC AAACTGGACG GACAACGGGC CACCGGAACA TACATACCGG AATCAAGTCC TGTATATAAA ACAGTCATGC GCGGTGAAAC CTACAGGGGC AAAGCCTTTG TCGTCAACGC ATGGTATATC ACTGCGTACA AGCCTCTGCG CGATCTGGGC GGCAATATAG TGGCTGTGGC CTATGTGGGC CGTAAAATAA TGACTCCCGC CCTTACCGAA GCCCTCGCCA GCATCAGCGT GGGGGGCCTC GGTTTTGCCT TTGCCTACAA CGACAAGGGC GAAATGATAT ACCACCCCGA GCATCAGGGC AAAACACTTT CAGACATCGG CGTGGAACAA TACTTTGCCG GTGTGCAGAA CGGACTGGTG ACCTATATGC GCGACGGGGC GGAACAGATA GCCTATGTCA GACATTTTGA ACCATGGGGC TGGCACATCG GCGTGCAGAT GAGCCGCAAA GAAGCACTGC GCGGCATGGA CACCATGGTG CTTACCGGCT CGCTGGGGGT GGCAGCTCTG GCACTGGTGG CAGGCTGTAT CTCCACATGG CTGCTGCTGC GCAGTATCAC CGGTTCGCTG AACAAGCTGG AAGGCTTTAC CGCGGCAGTG GCAACGGGCG ACTACAACGC CTCGGTGGAC TACAAGGCCG ACGATGCCAT AGGCAAAACC ATTGCAGCCG TCCGGCGCAT GGTGGAAGTC ATCAAGGAGC GCCTCGGCTT TTCCAACGGT ATCCTGCAAG GTATGGCCAC ACCCTGCATC GTTGTGGATA CGCAGGAAAA AATATCCTAC ATCAACCAGC CGGCCCTCAC GCTGCTGCAT GCACAGGGTT CCGCAGACAG CTGGACCGGA CAATCCATCG GCAAACTGTT CCACAACGAC GCATCGCGCC GCACCATTCT GGGCGATACA GTGCGCGACA GGCAGTCGCA GACCAACAAA GAACTGGTGC TGCAACGCAA CGGAGAAGAC ATTTTCCTGC GGGTGGACAC CGCGCCTCTG CATGACCTTG ACGGTACCCT GCTGGGAGCT TTCGGCCTGT ACACCGACAT GACCGAAAAC CACCGCCAGA ACAAAGCCAT GCAGGATAAA AACGACATCA TAGCGCAGGC TGCCGAACAG GCCGACGGTG TCTCGCAGAA CGTATCTGCC ACGGCTGCCG AGCTGTTCGG ACTCATCGAA GAGGCCAATC AGGGGGCCGA GGTACAGAAA GAGCGCACCG GCGAAGCCGC CACAGCCATG GAGGAAATGA ACGCCACAGT CATGGAAGTT GCGCGCAGTG CCGCAGAGGC CGCATCGGGC GCGGATGAAG CGCGTGCCAG AGCCGAAGAA GGCGCGCGCA TCGTCAGAGA TGTCATAAGC GCCAGCCGCA AGGTTTCGGA TGAAGCGGAA AACCTGAGCA GCAACATGCA GCTGCTGGGC ACACAGGTGG AAGGCATCAG TCAGATTATG AACATGATCA ACGACATAGC CGACCAGACA AACCTGCTTG CCCTGAACGC CGCCATTGAA GCCGCACGGG CAGGCGATGC AGGACGCGGG TTTGCCGTGG TAGCCGACGA AGTGCGTAAA CTGGCAGAAA AAACCATGGA CGCCACCAAA CAGGTGACTG TGGCCATTAC GGAAATTCAG GAAGGCGCCC GCCGCAACCT TGAAGCAACC CGCAAGGCCG TCAGCAGCAT CGAGGAAAGT ACCGACCTTG CCAACCAGTC GGGCGACGCA CTGCAGCAGA TTCTGAATCT TTCCGTGGAA ACTGCCGATC AGGTACGCTC CATCGCCACC GCCGCAGAAC AGCAGTCCGC GGCATCCGAA GAAATAAGCC ATGCCACGGC AGAGGTGGAC CGCATTTCAA CGGAAACCCT GCAGGCAATG AACCGGTCGG CCGACGCAGT GAGCCAGCTG GCGGAAGAAG CACGCCGCCT TCAGCAGATT ATTGAAATGA TGACCAGCGA ATAG
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Protein sequence | MFDKVTLSTK FYSGSIGVLV LAITLLCSVT MWLVSDGMTQ LGTATLQSTT ENLVTTIEMQ DAITQEKVSS DLSVLEREMQ GYGSLMLSDL HAHQTRMVNQ VTKEAATATI PALVLTSDEG MTPLYENFEI VDRVQKLIGG TATIFQVLPG KLLRISTNVL KLDGQRATGT YIPESSPVYK TVMRGETYRG KAFVVNAWYI TAYKPLRDLG GNIVAVAYVG RKIMTPALTE ALASISVGGL GFAFAYNDKG EMIYHPEHQG KTLSDIGVEQ YFAGVQNGLV TYMRDGAEQI AYVRHFEPWG WHIGVQMSRK EALRGMDTMV LTGSLGVAAL ALVAGCISTW LLLRSITGSL NKLEGFTAAV ATGDYNASVD YKADDAIGKT IAAVRRMVEV IKERLGFSNG ILQGMATPCI VVDTQEKISY INQPALTLLH AQGSADSWTG QSIGKLFHND ASRRTILGDT VRDRQSQTNK ELVLQRNGED IFLRVDTAPL HDLDGTLLGA FGLYTDMTEN HRQNKAMQDK NDIIAQAAEQ ADGVSQNVSA TAAELFGLIE EANQGAEVQK ERTGEAATAM EEMNATVMEV ARSAAEAASG ADEARARAEE GARIVRDVIS ASRKVSDEAE NLSSNMQLLG TQVEGISQIM NMINDIADQT NLLALNAAIE AARAGDAGRG FAVVADEVRK LAEKTMDATK QVTVAITEIQ EGARRNLEAT RKAVSSIEES TDLANQSGDA LQQILNLSVE TADQVRSIAT AAEQQSAASE EISHATAEVD RISTETLQAM NRSADAVSQL AEEARRLQQI IEMMTSE
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