Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2308 |
Symbol | |
ID | 3757319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2325002 |
End bp | 2325742 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637783199 |
Product | ATPase |
Protein accession | YP_388800 |
Protein GI | 78357351 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00400127 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCGA CTGAGCCAAT CATCAGCATT AAAAACATCT ACAAATTCTT CGGTGAACTG ACGGCCCTCA ATGATGTATC GCTGGACGTG CAGCCGGGAG AAAAGGTTGT GGTCATCGGC CCTTCCGGTT CGGGAAAATC AACCATGCTG CGTTCCATCA ACAAGCTGGA AACCATCGAC AAGGGCAGCA TCCGTGTGGA CGGCATGGAC ATAAATTCGC CGGAGAACGA CATAAACGCC ATCCGGCAGG AACTGGGAAT GGTCTTCCAG AGTTTCAACC TTTTTCCGCA CAAGACGGTG ATGGGCAACC TGACCATGGC TCCTGTGCGG CTGAAAAAGG TACCTCTGGA AGAAGCGGAA GCCCGTGCTC TCATGCTGCT GAAAAAAGTA GGCATCAGCG ACAAAGCCAA TGTCTTCCCT TCCAACCTGT CGGGCGGACA GCAGCAGCGC GTTGCCATAG CGCGCGCTCT GGCCATGAAC CCCAAAATCA TGCTGTTTGA CGAGCCCACA TCGGCACTTG ACCCCGAAAT GATCGGAGAA GTGCTGGACG TCATGGTGGC CCTTGCCAAA GAGGGTATGA CCATGGTGGT GGTTACGCAT GAAATGGGCT TCGCCCGGGA AGTTGCGGAC CGCGTGGTCT TTATGGATCA CGGCCAGATT CTGGAAGAAG GCACACCGGA CAGGCTGTTT GATTCGCCGG AACATCCCCG TCTGCAGAAG TTTCTCAAAC AGATTCTCTG A
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Protein sequence | MTATEPIISI KNIYKFFGEL TALNDVSLDV QPGEKVVVIG PSGSGKSTML RSINKLETID KGSIRVDGMD INSPENDINA IRQELGMVFQ SFNLFPHKTV MGNLTMAPVR LKKVPLEEAE ARALMLLKKV GISDKANVFP SNLSGGQQQR VAIARALAMN PKIMLFDEPT SALDPEMIGE VLDVMVALAK EGMTMVVVTH EMGFAREVAD RVVFMDHGQI LEEGTPDRLF DSPEHPRLQK FLKQIL
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