Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2256 |
Symbol | rplD |
ID | 3757267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2281280 |
End bp | 2281900 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637783147 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_388748 |
Protein GI | 78357299 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000129639 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTGG TTAAAGTATA CGATCAGGAC AAGAAGGAGA CGGGTGAACT CACTCTGGCT CCCGAGGTGT TCGAGGTCGA GGTCCGGCCG GAGATCCTGA ACCTTGTTGT ACGCGCACAG CGCGCGGCAA AGCGCGCCGG AACTCATTCG GTGAAGACGC GTTCGACCAT TTCCGGCGGC GGTGCCAAGC CCTGGCGTCA GAAAGGTACC GGTCGCGCCC GTTCGGGCAG CAACCGTTCT CCGGTCTGGC GTGGTGGTGC GGTTGTCTTC GGTCCCCAGC CCCGCGACTA TTCCTTCAAG GTTAACAAGA AGGTTCGCAA GCTGGCTCTG AAGATGGCTC TGAGCTCCCG TCTGGCTGAA GAAAACCTGA TGGTTGTCAA GGGCATTGAG CTTCCTGAAG TGAAGACCAA GCACATGGTG AAGGTTGCCG GCGCACTGGG CCTGGGTAAG GCTCTCGTCG TCACCCCCGA AATGGATGAC AAGCTGGTGC TCAGCGCCCG CAACATCCCC GGGATCACCC TGATGACCCC CGAGCAGCTC AGCGTTTTCG AAATTCTGAA GCACGCCCAG CTGGTTCTTC TTGAAGGGGC TGTTGAGCCT GTTCAGGAAC GACTGAAGTA A
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Protein sequence | MAVVKVYDQD KKETGELTLA PEVFEVEVRP EILNLVVRAQ RAAKRAGTHS VKTRSTISGG GAKPWRQKGT GRARSGSNRS PVWRGGAVVF GPQPRDYSFK VNKKVRKLAL KMALSSRLAE ENLMVVKGIE LPEVKTKHMV KVAGALGLGK ALVVTPEMDD KLVLSARNIP GITLMTPEQL SVFEILKHAQ LVLLEGAVEP VQERLK
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