Gene Dde_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2234 
SymbolrpsM 
ID3757245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2271349 
End bp2271717 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content56% 
IMG OID637783125 
Product30S ribosomal protein S13 
Protein accessionYP_388726 
Protein GI78357277 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0232268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAGAA TTGCTGGAGT TGATCTGCCC CGTGGCAAGA GGGTTGATAT CGCGCTGACC 
TACATCTATG GCGTCGGTCG CGCTACTGCC CTGGAGATTC TTGATACCAC CGGTGTTGAC
TGGACTCGTA ACATTGACGA CCTGTCTGCC GACGAAGTGA ACGAAATCCG TAAGGAAATC
GAACAGAATC ACAAGGTTGA AGGCGATCTC CGCCGTGAAA TATCTAGCAA CATCAAGCGT
CTGATGGACA TCGGCTGCCA CCGCGGCCTG CGTCATCGTC GCGGGTTGCC TGCTAGAGGT
CAGCGTACCA AGACCAACGC ACGTACCCGT AAGGGACCGC GTCGCGGTGT GGCTGGTAAG
CGCAAATAG
 
Protein sequence
MARIAGVDLP RGKRVDIALT YIYGVGRATA LEILDTTGVD WTRNIDDLSA DEVNEIRKEI 
EQNHKVEGDL RREISSNIKR LMDIGCHRGL RHRRGLPARG QRTKTNARTR KGPRRGVAGK
RK