Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2122 |
Symbol | |
ID | 3757130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2171586 |
End bp | 2173037 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637783010 |
Product | TPR repeat-containing protein |
Protein accession | YP_388614 |
Protein GI | 78357165 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.318434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAC CCGAGTTCAC CATTCCGCGT TACCGGCGCC CTGTGCGGCG CCGGTACGCG GCTCTGCTAA TCGCAGTGCT CTGCCTGAAC CTTGTTCTGG CACCGCTTGC TGCCGCTCCG GCGCACGCCT TCGGGTTTGG TGAATTCACT GTCAAAGACG AAATCGAACT GGGCAAAAAG TTCAGAGTTC TTGTAAAATC CCGCCTGCCA ATCATTGAAG ATCCTGAAAT AGCAGATTAT GTGCGGGAAC TTGTGGCCCG TCTGCAGGCC GTCATTCCGC CTCAGCCTTT TCCTTTTGAA ACCAGCGTGG TGCTGGACAA TAACATGAAC GCATTCGCCA CGCCCGGCGG ATACGTTTTT GTCTACACCG GTCTGCTGCT CAATCTTGAA AACGAATCGG AAGTTGCGGG GGTGCTGGCC CACGAACTGG CGCACGTGAC CCAGCGCCAT GTGGCCAAAC GCATCGAGGC CGCACAAAAA GTCAGTCTGC TGTCCATGGC CGGACTGCTG GCCGGTTTGC TGCTGGGCAA AGGGGAAGCC AAGGACGCCA TGCTTTTCGG CACTGCCGCG GCCACTCAGG CCGCCATGCT CAACTACAGC CGCACAGATG AGCGCGAAGC CGACCAGATG GGTATGCAGT ACCTGATCAA GGCGGGTTTT TCACCCTGGG GATTGCCCGG CGCCTTCAAA CACATTCAGA ACCAGCAGTG GCGCAGCGGC GGCGGTGTGC CGCAATATCT CAGCACACAC CCCGACGTAC AGCAGCGTAT ACAGTATCTG AGCAATCAGG TCCGCCTGCT GCCCGCTGCC CAGCGCGAAA TCAAAGATGA CAACACCCGC TTCCGGCGCA TCCAGACCCT TATCAGGGCC CGCTTTGCCG ATCAGGAAGC AGCAATGCAC TATTTCAACA ATTCCGGAAC ACTGCCGCCG GAACTGGCCC TTATGGGCAA AGGCATTGTC TACGCGCGGC AGAACAAAAT CTCCACCGCA GCGGAATTTT TTGATCAGGC AGTCAGCCTT GCGCCTTCAG ACGCTCTCGT CCTGCGTGAG GCCGGGCGCT TCCATTATAA TAAAGGAGAC AGCAAGCGCG CAGCAGGACT GCTGCAGCGG GCAGTGATGA ACAACCCGCA CGACCTGATG GCGCTGTTTT TCTTTGCACG GCTGCTGGCA GACAACGGAC AGGTGGATAA AGCCGTGGAA TACTACCGGC AGGTATTACA GAAACTGCCC GAAGACTCAG AAGTTCACTA CTACTACGGG CGCATGCTCG GAGAAAACAA CCGATTGTTT GAAGGTCATC TGCAGCTGGC ATACAGCGCA CTCTACGCCA ACAACAAACG CAAAGTGGAA TTTCACCGCA AGCAGGCGGA AACACTTGCC CGCACAGAGG ATGACAAGGC CGAACTGGAA CGGTTTGACA CCCGTCATGC AGAACGTGCG GAGTTCTGGT AG
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Protein sequence | MAAPEFTIPR YRRPVRRRYA ALLIAVLCLN LVLAPLAAAP AHAFGFGEFT VKDEIELGKK FRVLVKSRLP IIEDPEIADY VRELVARLQA VIPPQPFPFE TSVVLDNNMN AFATPGGYVF VYTGLLLNLE NESEVAGVLA HELAHVTQRH VAKRIEAAQK VSLLSMAGLL AGLLLGKGEA KDAMLFGTAA ATQAAMLNYS RTDEREADQM GMQYLIKAGF SPWGLPGAFK HIQNQQWRSG GGVPQYLSTH PDVQQRIQYL SNQVRLLPAA QREIKDDNTR FRRIQTLIRA RFADQEAAMH YFNNSGTLPP ELALMGKGIV YARQNKISTA AEFFDQAVSL APSDALVLRE AGRFHYNKGD SKRAAGLLQR AVMNNPHDLM ALFFFARLLA DNGQVDKAVE YYRQVLQKLP EDSEVHYYYG RMLGENNRLF EGHLQLAYSA LYANNKRKVE FHRKQAETLA RTEDDKAELE RFDTRHAERA EFW
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