| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2115 |
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| Symbol | |
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| ID | 3757123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2162903 |
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| End bp | 2165428 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637783003 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_388607 |
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| Protein GI | 78357158 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.356238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTCA GTAGACCGAA GCGGTTCATA CTGCCAAACC GCGGCGGGAC GCGCCGTTTT
TTTACCAAAA GTTTCTGCGA GGAGATAGCC GCCGTGCCCG ATTTCAGACG AGCGCTGAGT
GATGATACCC TGTTGTTTTT CGACGGGGCC ATGGGAACCA TGCTGCAGGG GCGGGGGCTG
CCCGCCGGCA TGAGTCCCGA AGTCTTCTGT CTTTCCAATC CGGCTGTGCT GCAGGGTGTT
CATCTGGACT ACGCACGCGC AGGGGCGGAT GTGCTGACCA CCAACACGTT CGGGGGAACA
CGCCTCAAGC TGCCCGAGGG CATGAACGTG GTGGAATTCA ACCGCGAAAT GGCCAGAGCC
GCAAAGGCCG CCGCCGGTCA GGCCGGACGC ACCGTGTTTG TGGCGGGCAG TGTGGGGCCC
ACAGGACACT TTGTAAAGCC GCTCGGCGAT CTGGAATTTT CGGAACTGGT TGATATTTTT
CGTGAACAGA TCCGCGGGCT TGTGCAGGGC GGAATAGACC TTGTGCTTGC CGAAACGCAT
TTTGATCTTG CCGAAGTGCG TGCCGTGGTG CTGGCCGCGC GCGCCGAGTG CAATCTGCCT
GTGGGCGTGT CCATGACCTT TGAAGATGGC GTGAGTCTTA CAGGAACACG TCCCGAAGTT
TTTGTCCATA CCATGCAGAA CATGGGAGTG GACCTTATTG CCACCAACTG CAGCGCAGGA
CCGGAGCAGA TGGCGGGAGT GGTGGCCGGA CTGACTGCCG CGGGAGACAT ACCCGTACTG
GTCATGCCCA ATGCCGGCCT GCCCGAGCTG GAAAACGGCA ACACGGTGTT CCGGCTGGGA
CCGGAAGAGT TTGCCGCGCA GACTGCGGAC TTTGTGCGTG CCGGTGTGCG GTGTCTCGGC
GGGTGCTGCG GTACGACCCC CGATCATATT GCCGCGCTGG CGCGTGAGGC GCGCAGCAAG
CCCCGTCCGG CGGTTGAAAA ACGCCGCCGC TCCGGCATTG TGCTGACGAC CAGAGCCGCT
TGTCTGCGTA TCGGTCACGA CCAGCCCTGC AGGATAATCG GGGAACGTAT AAACCCTACC
GGCAAAAAGG AACTGACAGC ACAGCTGCAG GCAGGCGATT TTACACTGGC CATGCAGTTT
GCACAGCAGC AGATTGATGC CGGAGCCCCC TTGCTGGATG TGAACGTGGG TGCGCCCATG
GTGGACGAAA AAGTGCTGCT GCCGCAGCTG ATCTCTGACC TCGCTGCAGC TCACGGGGTT
CCTCTTTCCA TAGACAGCTC GGATATGGAC GCCGTGGAGG CTTCGCTTGC CGTATACGCG
GGGTCCCCTC TGGTCAATTC CATCAGCGGC GAACCGGGAC GCATGGAACG CCTGGGGCCG
CTGTGCAGAG ATTACGGGGC GCCATTTGTT CTGCTGCCCC TGAAAGGCCG AAAACTGCCC
GTCACGGCCG CCGAGCGTAT ATCCATCATC GATGAACTGC TTCTGCAGGC CGATGATCTG
GGCATTCCCC GCAGGCTGGT TATGGTTGAT GTGCTGGCTC TGGCTGTTTC CTCCAAGGCG
GAAGCTGCGC GGCACTGTTT CGATACCATC CGGTATTGCA ACGAAGAGCT GGGACTGCCC
ACCACCATTG GACTGTCAAA TATTTCTTTC GGTCTGCCTG CGCGTGAACT GCTGAATGCC
ACGTTTCTTG CCATGGCCGT GGGGGCCGGA CTTACTTCCT GTATCGCCCA CCCCGGCAAC
GTCAGACTGC GGGAAGCACT GGCCGCAGCC GAGGTGCTTA TGGCGCGCGA CAGCAATGCC
GAGCGGTTTA TCGCCGGCTA CTCCGGCTGG ACATCAGGAG GCGGCAGCGG CGGCATTATT
GCCGGCGGCG GAGAAGAGAA AAAACGCCCC GTCAGTCTGG AAGAGGCTGT CATACGCGGA
GAACGCGACA TCATTCTGGA ACTGGTGGAA GACGAACTGG CCCGAGGCGC ACAACCGTAT
GCTCTTGTTA ATGAAAGGTT GATTCCGGCC ATTACCGAGG TGGGCGACAA ATACGAGCGC
AAGGAGTATT ACCTGCCGCA GCTGCTGCGT TCCGCAGAAA CCATGCAGAA AGCTTTCGGC
AGGCTTAAGC CCCTGCTGGA AGAGGCTTCC GGCGGCGAGA CAAAACCGGT CATCATTATG
GCCACCGTGG AAGGCGATAT TCATGACATC GGAAAGAATA TTGTCTGTCT TATGCTGGGC
AACCATGGTT TTGATGTTGT TGATCTGGGC AAAGATGTTA AAGCGGTGGA TATTGTAGAT
GCCGCAGTGG AGCATAACGC GAAGCTGATA GGGCTTTCGG CCCTGATGAC CACTACCATG
GTGCGCATGG AAGACACCAT ACAGCTGCTG CGCGAACGCG GGCTTTCCAT TCCTGTTTTT
GTGGGCGGGG CTGTTGTCAC GCCTGCTTTT GCCGAAGCCA TCGGCGCAGC GGGATACTCC
CGCGATGCCG TGGAAGCGGT GAGAATTGCG CGGGGGCTTG TGGAAGCTCC AGCCAGAGTG
CAGTGA
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| Protein sequence | MFFSRPKRFI LPNRGGTRRF FTKSFCEEIA AVPDFRRALS DDTLLFFDGA MGTMLQGRGL
PAGMSPEVFC LSNPAVLQGV HLDYARAGAD VLTTNTFGGT RLKLPEGMNV VEFNREMARA
AKAAAGQAGR TVFVAGSVGP TGHFVKPLGD LEFSELVDIF REQIRGLVQG GIDLVLAETH
FDLAEVRAVV LAARAECNLP VGVSMTFEDG VSLTGTRPEV FVHTMQNMGV DLIATNCSAG
PEQMAGVVAG LTAAGDIPVL VMPNAGLPEL ENGNTVFRLG PEEFAAQTAD FVRAGVRCLG
GCCGTTPDHI AALAREARSK PRPAVEKRRR SGIVLTTRAA CLRIGHDQPC RIIGERINPT
GKKELTAQLQ AGDFTLAMQF AQQQIDAGAP LLDVNVGAPM VDEKVLLPQL ISDLAAAHGV
PLSIDSSDMD AVEASLAVYA GSPLVNSISG EPGRMERLGP LCRDYGAPFV LLPLKGRKLP
VTAAERISII DELLLQADDL GIPRRLVMVD VLALAVSSKA EAARHCFDTI RYCNEELGLP
TTIGLSNISF GLPARELLNA TFLAMAVGAG LTSCIAHPGN VRLREALAAA EVLMARDSNA
ERFIAGYSGW TSGGGSGGII AGGGEEKKRP VSLEEAVIRG ERDIILELVE DELARGAQPY
ALVNERLIPA ITEVGDKYER KEYYLPQLLR SAETMQKAFG RLKPLLEEAS GGETKPVIIM
ATVEGDIHDI GKNIVCLMLG NHGFDVVDLG KDVKAVDIVD AAVEHNAKLI GLSALMTTTM
VRMEDTIQLL RERGLSIPVF VGGAVVTPAF AEAIGAAGYS RDAVEAVRIA RGLVEAPARV
Q
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