| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2093 |
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| Symbol | |
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| ID | 3757101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2141016 |
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| End bp | 2143133 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637782981 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_388585 |
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| Protein GI | 78357136 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.259807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACAGAC GAGGAGCACC TGTGAAGCAG GATTCGGCCA AGGTTGAACA GCGCATGGAA
GAACTGCGCA CTTTGCTGGA GTATCACGGT CACCGGTACT ACGTGATGGA TGAGCCCGAA
ATATCCGATG CGGAGTACGA TGCCCTTTTC AGGGAACTGG TGCGGCTGGA GGAGGAACAC
CCTGAGCATA TCCATCCGGG GTCGCCCACG CATAAGGTTG GCGGGCAGAT ACTAGACGGA
CTGAAGCCCC GTGAGCACTC CCTGCGCATG TACAGTCTGG ATAACGCATT CGGTATTGAA
GAGTTCCGCG AATTTGTCGA GCGCGTTGTC CGGCTGGAAC CTGATGCTCC GCTTGAATTC
TGGGTTGACC CCAAAATGGA CGGGTTGGCC ATGGAACTTG TTTATGAAAA CGGAGTGTTT
TTGCTGGCTG TGACCCGCGG AGACGGCAGC ATGGGGGAAG ATGTGACCCA CACCATGCGC
ACGGTACGCA ATGTCCGCAT GCGGCTGAAT CCGGAAATTG AAGCACCCGT GCGGCTTGAA
GTGCGTGGAG AGGTTATTAT CACCCGCGCC GATTTTGAAG CGCTTAATGC GCGGCAGCAG
CAGAAGGGGG GCAAACTGTT CGCCAACCCC CGCAATGCCG CCGCAGGCTC TGTTCGCCAG
CTGGATTCTT CCGTGGCGGC GGCGCGCCCT CTGCGTTTCA TGGCATATGG CGTGGGGCAG
GTTGTCTGGG CGGACGGCAG ACAGCGCTGG CGGACCCAAT ATGACATAAT GCGGGGACTG
CAGGAGCTTG GGTTTGCCGT ACCTTCTCAG GGCAGACTGT GCGCTGCGCC TGCAGATGTG
GAAGCCGCTT TTACCGAGCT TTCTGCCGCG CGGCATGAAC TGCCGTTTGA AATAGACGGC
GTTGTCGCCA AGCTGAACGA CCTTGACCTG CAGGAGGCTC TGGGGTTTAC GGCCAGGGCT
CCTCGCTGGG CCATTGCGCT TAAATTTCCC GCGCATCAGG CGCGTACCCG CCTTAAGGAC
ATCAGAATTC AGGTGGGGCG GACTGGTGTG ATGACGCCTG TGGCCGAGCT TGAGCCGGTG
ACTGTGGGCG GGGTGACTGT TTCCAGCGCC ACTTTGCATA ATGAAGATGA AATACGTGCC
AAGGGCCTTA TGCTGGGCGA TGTTGTCATT GTGCAGCGGG CGGGGGATGT GATTCCCGAA
GTGGTACGCG CGGTGCCGGA AGAACGCACC GGAGCTGAAC GTGAGTATGT TTTTCCTGCC
GTGTGTCCTG TCTGCGGCAG TGCTGCCGTG CGCGGCGAAG GGGAGGCCGC CTGGCGCTGC
ACCAATATGC AGTGCCCTGC CGTGCGCAAG CAGGCAATCA TTCATTTTGT TTCCAAGGCC
GGTCTGGACA TAGACGGAGT GGGTCGCAAG TGGATTGAGC AGCTGGTGGA CAGCGGCAGG
GTGGTTTCTC CGGCTGATCT TTTCCGCATT ACGCGGGAGG ACCTGCTGGG CATGGAGCGC
ATGGGCGAAA AACTGGCTTC CAATTTTATA GAGGCTTTTG ATTCGGCACG CCACGAATCC
ACGCTCCAGC GTTTCATCTG CGCGCTGGGT ATCCGCCATG TGGGTGAGCA GACTGCCAGA
ACGCTTGCCG CCCGTTTCGG CAATATGGAC GAACTGATGC GTGCCGATCA GGAGACATTG
CAGTCTCTGC GTGATATCGG CGGCGAGGTG GCCGGTTCCA TACGAGCTTT TTTTGCCAAC
GGGCAGAACA GGGAGCTTTT GCAGCAGTTC AAGAATCTTG GTCTGTGGCC CGAGGAGCAG
CAGCCTGCAG GTGACAGCAC GCCGGTGACA CCGCTTGCGG GCAAAAAAAT TCTTTTTACC
GGTTCGCTGG TGCGTATGAC GCGCTCTGAA GCCAAAGCTA TGGCAGAAAA AGCGGGGGCA
GCCGTCATGA GCGGCGTTTC CGCCAGACTT GATATACTTG TGGCCGGAGA CAAGCCCGGC
AGCAAGCTGG AAAAAGCCCG TTCACTGGGA ATAACGGTTC TGACGGAAGA TGAATTCATC
AGGCAGGCAT CAGAGTCTGA AGAAATTTCC GGACAGGCTG CAGATGACTA TGAAAACAGT
CTGCTGCGCG TGCAGTAG
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| Protein sequence | MDRRGAPVKQ DSAKVEQRME ELRTLLEYHG HRYYVMDEPE ISDAEYDALF RELVRLEEEH
PEHIHPGSPT HKVGGQILDG LKPREHSLRM YSLDNAFGIE EFREFVERVV RLEPDAPLEF
WVDPKMDGLA MELVYENGVF LLAVTRGDGS MGEDVTHTMR TVRNVRMRLN PEIEAPVRLE
VRGEVIITRA DFEALNARQQ QKGGKLFANP RNAAAGSVRQ LDSSVAAARP LRFMAYGVGQ
VVWADGRQRW RTQYDIMRGL QELGFAVPSQ GRLCAAPADV EAAFTELSAA RHELPFEIDG
VVAKLNDLDL QEALGFTARA PRWAIALKFP AHQARTRLKD IRIQVGRTGV MTPVAELEPV
TVGGVTVSSA TLHNEDEIRA KGLMLGDVVI VQRAGDVIPE VVRAVPEERT GAEREYVFPA
VCPVCGSAAV RGEGEAAWRC TNMQCPAVRK QAIIHFVSKA GLDIDGVGRK WIEQLVDSGR
VVSPADLFRI TREDLLGMER MGEKLASNFI EAFDSARHES TLQRFICALG IRHVGEQTAR
TLAARFGNMD ELMRADQETL QSLRDIGGEV AGSIRAFFAN GQNRELLQQF KNLGLWPEEQ
QPAGDSTPVT PLAGKKILFT GSLVRMTRSE AKAMAEKAGA AVMSGVSARL DILVAGDKPG
SKLEKARSLG ITVLTEDEFI RQASESEEIS GQAADDYENS LLRVQ
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