| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2050 |
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| Symbol | |
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| ID | 3757058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2092991 |
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| End bp | 2094103 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637782938 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_388542 |
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| Protein GI | 78357093 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0291129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTA GCCCGCTTAA AGATGTTGCC GGTTCGGTGC ATGCTGTCTG CGACGGCCGC
CTGCACTGCG ATTTTTCTGC TGACGGCCGT ATGTGCGAAG CTCTTGACAA CGCAGGAGTG
CCCCGTGATG CAAAGTGGCG GACTCTTGTT TTGTACATGC GAGGCATGCA GGAATATTCC
TATCTGACAG ATGAACAGAA AATGCAGGTT CAGCAACTGC TTGTTGACCT GTTGCAAAAC
AAAGATTTTT CAGACCGGAA TTACGAGAGA ATTCTGGAGC GTGACAGACA GATTCTTGTG
GCACCCTATG AGCAGCGTCT TAACAGGGCC ATGCAGGAAA CCATGGCTCT TGCCGGCGAG
TTCCGCAGTA TCCTGCTGCG CAGAAAAGGT GATGTGGAGC ATCTGGAATC CCGCAGCATT
CAGGCGGTGA CCGAGGGCAG AGAGCCCGAA GAAGTCGTGG CTTTGCTGAA AGATACCTTT
CGTGAAGTTC TGCTTGAGAT GGAGCGTGAC GCCGCAGCCA TGACAGAACT GACCCAGCGT
GATCCTTTGA GTGGTCTGCA TAACAGGCGC GCATTTGATG CCTTTCTTTC CGGCGCGGTT
CAAAGCTGGC GCAGAGAGGG AACCCCGCTT TCTCTCATCA TGTTGGACAT TGATAATTTT
AAAAATTTCA ACGACGAATA CGGCCACCGC ATAGGGGATC AGGCCATTCA GACCGTGGCC
AGAATTTTAC AGGAGGCTGT CCGCGGGCAT GCTGCCGAAC ACGAAAAAGA TTTTCTTGTT
GCCCGTTACG GGGGCGAGGA GTTTTCCGTG GTGCTCAGAG GGGCACTTGC TTCTCTGGCG
GAAAAAATTG CAGAGAGCGC CCGCAGCAGC ATGGAGAATT TTAACTTTGT CATCCGCAAT
AACAGCGGGG AGGTGGTGCG AAGCGGCATC AGCATCACCC TGAGTGCCGG AGTGGCTTTT
GCCAGCAGTT TGTGGCGCGG CGCTTATGAG GATAATCTTA TCGATTCCGC AGATCGGGCT
CTTTATGAGG CCAAACGCGG CGGACGTAAT CTGGTGTTCA GGTACCGTGA TGATCAGGAC
GGCAACAGCC GGTATGAGCT TGTGGACAGC TGA
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| Protein sequence | MKISPLKDVA GSVHAVCDGR LHCDFSADGR MCEALDNAGV PRDAKWRTLV LYMRGMQEYS
YLTDEQKMQV QQLLVDLLQN KDFSDRNYER ILERDRQILV APYEQRLNRA MQETMALAGE
FRSILLRRKG DVEHLESRSI QAVTEGREPE EVVALLKDTF REVLLEMERD AAAMTELTQR
DPLSGLHNRR AFDAFLSGAV QSWRREGTPL SLIMLDIDNF KNFNDEYGHR IGDQAIQTVA
RILQEAVRGH AAEHEKDFLV ARYGGEEFSV VLRGALASLA EKIAESARSS MENFNFVIRN
NSGEVVRSGI SITLSAGVAF ASSLWRGAYE DNLIDSADRA LYEAKRGGRN LVFRYRDDQD
GNSRYELVDS
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