| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2013 |
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| Symbol | |
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| ID | 3757021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2054696 |
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| End bp | 2056138 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637782901 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_388505 |
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| Protein GI | 78357056 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000140166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGAT ACACCAAACG CCTTCAGCTC ACGTTGCTGA CAACCGTATT CGCGCTGGCC
GCCACCATGG CCCACGCGGC CGGAGTTCCT GATTTCACCG CACTGTCCGC AAAAGCCGGA
CCGGCAGTTG TCAACATCAA CACCGAAAAA AGCGTGGAAA ACAAAATTCC CGAACAATGG
AGAGAATTCT TCCAGAACAG ACCCCACGGT CTGCCTTTTG ATGATTTCTT CAACCAGTTC
GAGCGTTTTT TCAACCAGCC CCAGCGCCCG CGCAAACAGC GCTCGCTCGG TTCGGGCTTC
ATCATCTCTC CGGACGGATA CATTGTCACC AACAACCATG TGATCGCCGG CGCCGATGTA
GTTTCGGTAA ACGTGGAAAG TGCCAAAGGC GAACCGGACA CGTTTGAGGC CACTGTTGTC
GGCACCGACA GCGAAACAGA CCTCGCTCTG CTTAAAATCG ATGCAGGCCG GCCGCTTGCC
ACCCTGCCGT TCGGTGATTC CGACGCACTT CAGGTCGGCG AATGGGTTAT GGCCATCGGC
AACCCCTTCG GTCTTGACCA CTCGGTGACT GCAGGCATCA TCAGCGCGCT GGGCCGCGAT
ATCCGCTCCG GTCCATTCGA CGATTTCATT CAGACTGATG CGTCCATCAA CCCCGGTAAC
AGCGGCGGCC CCCTCATCAA CAGTGACGGC AAAGTGATAG GCATCAACAC CGCCATCATA
GCCAGCGGTC AGGGCATTGG ATTTGCGGTA CCCAGCAACC TTGCAAGAAG GGTCATAGAA
GAACTGAAGA CAAACAAGCG GGTGGCCCGC GGCTGGATAG GCGTCACCAT TCAGGACATT
GACGAAAATA CCGCCAAGGC GCTGGGACTT AAAAACACCA GAGGCGCGCT CATCGGCAAT
GTGCTCAGCG GGGAACCCGC AGACAAAGCC GGAATACGCG CGGGCGATAT CATCATCAAA
GTGAACCGTA ATGAGATTTC CGGTGCCTCT GACCTGTTGC GCACCATCGC CGACCTGTCC
CCCGGAGACA AGGCCACAGT GGTCGCCGTG CGCAACGGTG CGCAAAAGAC CTTCACTCTC
ACGCTGGGCG AGAGAGGAAC AGAAATGGCA GCCCGCGATG AAACCCCGCA ACAGAAGCAG
AATGCCGCCA CAGGTCAGCT GGGGCTCAAG CTGCGCCAGA TGACAGAGCA GGAAGCCGGA
CAGCTTGGTC TCGAATCAAC CAATGGACTG CTTGTGGTGG GTATCCAGCA AAATTCACCC
GCCGCCATGG CAGATCTGCG GCCCGGCGAT GTGATCCTGA TGGCGAATCT GAAGCCTGTG
AACACCGTCG GCCAGCTGCA GAAAATTGTT GAAGGCGACG CCGCAAAGCG CGGAGCCATC
ATGTTCCAGA TATACCGCAG GGGTGAGACG TTTTTCCGCA CGCTCTCCCT GAGTGCCGAA
TAA
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| Protein sequence | MNRYTKRLQL TLLTTVFALA ATMAHAAGVP DFTALSAKAG PAVVNINTEK SVENKIPEQW
REFFQNRPHG LPFDDFFNQF ERFFNQPQRP RKQRSLGSGF IISPDGYIVT NNHVIAGADV
VSVNVESAKG EPDTFEATVV GTDSETDLAL LKIDAGRPLA TLPFGDSDAL QVGEWVMAIG
NPFGLDHSVT AGIISALGRD IRSGPFDDFI QTDASINPGN SGGPLINSDG KVIGINTAII
ASGQGIGFAV PSNLARRVIE ELKTNKRVAR GWIGVTIQDI DENTAKALGL KNTRGALIGN
VLSGEPADKA GIRAGDIIIK VNRNEISGAS DLLRTIADLS PGDKATVVAV RNGAQKTFTL
TLGERGTEMA ARDETPQQKQ NAATGQLGLK LRQMTEQEAG QLGLESTNGL LVVGIQQNSP
AAMADLRPGD VILMANLKPV NTVGQLQKIV EGDAAKRGAI MFQIYRRGET FFRTLSLSAE
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