| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1823 |
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| Symbol | |
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| ID | 3756826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1872443 |
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| End bp | 1874074 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637782707 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_388315 |
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| Protein GI | 78356866 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0200006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACGG CTGACGCGGT TCAGACTTCC CGGGGCTTCT GGGGACCGTT GCAGGGCACA
AAAAACAGCA TCGGTTCATG GATTTTTTCA ACAGACCACA AACGTATCGG CATACTGTAT
TTCTATGGTA TAATAGGATT TTTCCTCGTG GGGCTGCTTC TTGGCTTTCT TGTACGCCTT
GAGCTTATCG CCCCCGGAAA AACCATCATG GACGCGCAGA CATACAATGC CATATTCACG
CTGCATGGCG TGGTCATGAT TTTTCTGGTG GTCATCCCCA GCATTCCGGC CGCATTCGGC
AATATCTTTC TTCCCATTCA GATAGGGGCC GAGGATGTCT CCTTTCCCCG CCTGAACAAT
TTTTCATGGT GGCTTTATGT CACCGGTGCA GTGCTCGCGC TCAGCTCTCT CTTTACGGGT
GACGGTCCGC CGGACACGGG CTGGACGTTT TACGTCCCCT TCAGCAACGT GACCACCACA
AACGTCAACG TGGCTCTTGC AGCCGTATTT GTTCTGGGTT TTTCTTCCAT ACTCACCGGC
CTCAATTTCA TCACCACCAT CCACCGATTG CGGGCCGAGG GCATGACATG GACCCGGCTG
CCTCTTTTTG TCTGGTCGCT GTATGCCACC GGCTGGATTC AGGTACTCGC CACTCCGGTG
CTTGGTATCA CCGTGCTGCT GGTTGTGGTT GAAAGGGTAA TGGGGGTGGG GCTGTTTGAC
GCCACCAAAG GCGGCGACCC GCTGCTGTAT CAGCACCTTT TCTGGATATA TTCACACCCG
GCCGTGTACA TAATGATTCT GCCCGCCATG GGTGTAATTT CCGAAATAAT TCCGGTATTT
TCCCGCAAGA AAATCTTCGG CTACAAGATG ATCGCTTTTT CCAGCCTTGC CATAGCCTTT
GCGGGTTCAC TGGTATGGGC GCATCATATG TTCACCAGCG GCATGAGCGA TACCGCAGTG
CTGGTTTTTT CGTTTCTCAC ATTTGTCGTC GCCATTCCTT CTGCCATCAA GGTGTTCAAC
TGGGTTTCCA CCATGTTCAA GGGGTCCATC TATCTTGAAC CGCCCATGTA CTACGCCATG
GCGTTCATCT TTCTCTTTTC CATAGGTGGG CTTACCGGAC TGGTGCTGGG CGGGGCCGGA
ACTGATATCC ATGTGCATGA TACATATTTT GTTGTCGCGC ACTTCCATTA TGTCATTTTC
GGCGGGCTCG GGTTCGGTCT GTTCGGAGCC ATGCATTACT GGTTCCCCAA AATATACGGA
AAGATGTATA ACAAAAGAGT GGCCAACATC TCCTGTCTGG TTACTTTCAT CGGTTTCAAC
GTTCTGTACT TTCCGCTTTT CGTCATCGGC CTGCAGGGCA TGCCGCGCAG ATATTACGAC
TATCTGCCGC AGTACACCAC GGGGCATTTC ATTTCCACAG TAGGATCCTG GATTCTGGCC
GCAGGGCTTC TGCTCATGCT GTGGAATCTG TTCAAGGGAG CACGCAGCGG CCCCCGGGCC
GGTGACAATC CTTGGAACGC CGTGACATTG GAATGGCAGG TTCCTTCTCC TCCCCCGCAT
CACAACTTTG TTGAAGAACC TGTGGTCACA CACGGGCCGT ACGACTTCAG GGAGGTGACT
TCCGATGAGT AA
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| Protein sequence | MATADAVQTS RGFWGPLQGT KNSIGSWIFS TDHKRIGILY FYGIIGFFLV GLLLGFLVRL
ELIAPGKTIM DAQTYNAIFT LHGVVMIFLV VIPSIPAAFG NIFLPIQIGA EDVSFPRLNN
FSWWLYVTGA VLALSSLFTG DGPPDTGWTF YVPFSNVTTT NVNVALAAVF VLGFSSILTG
LNFITTIHRL RAEGMTWTRL PLFVWSLYAT GWIQVLATPV LGITVLLVVV ERVMGVGLFD
ATKGGDPLLY QHLFWIYSHP AVYIMILPAM GVISEIIPVF SRKKIFGYKM IAFSSLAIAF
AGSLVWAHHM FTSGMSDTAV LVFSFLTFVV AIPSAIKVFN WVSTMFKGSI YLEPPMYYAM
AFIFLFSIGG LTGLVLGGAG TDIHVHDTYF VVAHFHYVIF GGLGFGLFGA MHYWFPKIYG
KMYNKRVANI SCLVTFIGFN VLYFPLFVIG LQGMPRRYYD YLPQYTTGHF ISTVGSWILA
AGLLLMLWNL FKGARSGPRA GDNPWNAVTL EWQVPSPPPH HNFVEEPVVT HGPYDFREVT
SDE
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