Gene Dde_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1817 
Symbol 
ID3756820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1867721 
End bp1868080 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content53% 
IMG OID637782701 
Productprotein translocase subunit yajC 
Protein accessionYP_388309 
Protein GI78356860 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0910437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTCGA CTAGTGTGGC CTATGCCATG GGTGCCGGCG CGGAAGCCGG AGCACAGGGT 
GGCAACCCGA TCATGAGCTT TGTGCCCCTG ATTCTGATGT TCGCGATTTT CTACTTCATG
CTCATCCGGC CTCAGCAGAA AAAGGCAAAA GAGCATCGCG AAATGCTTGG TAACCTGAAA
AAAGGTGACC GTGTGATCAC CGGCGGCGGC CTGTATGGAT GTATCGTCGA AGTGAGTGAT
GAATGGCTGT CCGTTGACCT CGGGCAGACT GTCGTCAAAG TCGGCCGCGG TTTCATTTCC
GGTCTTGCCG ATCCCAAAAA CGGCAAAAAA GAAGAACCCG CCAAGGACAG CAAGAAATAA
 
Protein sequence
MFSTSVAYAM GAGAEAGAQG GNPIMSFVPL ILMFAIFYFM LIRPQQKKAK EHREMLGNLK 
KGDRVITGGG LYGCIVEVSD EWLSVDLGQT VVKVGRGFIS GLADPKNGKK EEPAKDSKK