| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1781 |
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| Symbol | |
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| ID | 3756781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1832880 |
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| End bp | 1834487 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637782662 |
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| Product | metallo-beta-lactamase family protein |
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| Protein accession | YP_388273 |
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| Protein GI | 78356824 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.133044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTC AATTTCTCGG CGCAGCCCGT ACTGTCACTG GTTCATGTTA TGTGGTCGAA
TCCGGCGGTG TCCGCTTTGC AGTTGATTGC GGCATGCATC AGGGAAACCA CGAAATAGAA
AAAAGAAACT ACGAGACAGA TGTATACTCT CCTGAAACGA TAGATTTTTT TCTGATAACT
CACGCTCATA TAGACCACAC CGGCCTGTTG CCGCGCATGG TGCGCGACGG TTTTACGGGG
CCGGTATATT GTACCGAACC TACCAGAGAC CTTCTTGAGA TCATGCTGCA GGACAGCGCC
AATATACAGG AAATGGAAGC GGAATGGCAG ACCCGCAAGC AAAAACGTAA AGGGCGCAAA
CCGGTAGACC CGCTGTACAC CTTTGCAGAT GCAGCGCGGG TTTCACGTTT TTTCGAGAAT
GTAGAGTATA ACCGGCCTTT TTCTCCTGTG GAAGGGGTTA CGGTGACATA TAAAGACGCA
GGCCATATTC TGGGTTCCGC GTTTCTTGAA ATTGAAGTTT GTGAACACGG GCGCTGCTCA
CGGTTGATTT TTTCCGGCGA CCTTGGCAAA CCCAACTCGC TCATAGTGCG CGACCCCGAA
GCTGCTGCCG CAGCGGATTA TCTGTTTGTG GAGTCAACAT ATGGTGACAG AAACCATAAA
GATGAGAGCA ACAGCAGGCA GGAGCTGGCA GAAGCCATAG CATACAGTTA CCGGCAGGGT
GAAAAGGTCA TCATACCCGC CTTTGCGGTT GAGAGAACAC AGGAAGTCCT GTACACCCTG
TTCCTGCTGC AGAAAGAGGG GCGTATGCCG GTGGATATGC CCATTTTCCT TGATAGCCCT
CTTGCCATCC GTGCCACTGA GATATTCCGC AAGCATCCGC GCTTCTTTGA TGAAGAAATG
CAGAAGTTGC TGCTTTCCGG AGAAGACCCG TTTGCCATGC CCAGCCTGCG GCTGACAACA
AAAACACAGG AATCTCAGGC CATCAACAAT TACACGGGAC CGGCCGTTAT CATTTCAGCC
AGCGGCATGT GCAACGCCGG TCGCATCAAG CACCACCTCA GGCACAACAT CTGGCGTCCC
GGTGCCAGCA TTGTCTTTGT GGGGTATCAG GCAGTGGGAA CCCCCGGCCG CAGAATAGTG
GACGGTGCCC GCAGTATCCG TCTCTTCGGC GAAGAGATTG CCATACAGGC AAAAGTCTTT
ACCATAGGCG GTTTTTCGGG GCATGCGGGG CAAAGCCAGA TACTGGACTG GGTGGGAAAA
TTTGCCACCA AAGAGATGAA AGTGTTTCTT GTGCATGGTG AAGAGAAAGC CCAGCAAGCA
CTTAAGGCCA TACTGGAAGA GAAATATGAG TTGTCTGTTC ACAGTCCGGG ATATCTGGAA
GAAATAGAGC TGGAACCGGG GGAGGCTGTT GTCACCACCG GCGACCCGCA GCGCTATCAG
CCGCAGCTTA ACTGGGATTT TCTGCTTTCG GAAACAGAGG CACGCATGAT GCAGCTGCGC
GCCCGCAAAG GCGACATCGA ACATGCCGAC TGGGCGCAGC AGGTTGAAAT ACGTGACCGT
CTGCTTGAAT TAAACAACGA AATGCTTGGT ATTCTTTCCG AGCTGTAA
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| Protein sequence | MKVQFLGAAR TVTGSCYVVE SGGVRFAVDC GMHQGNHEIE KRNYETDVYS PETIDFFLIT
HAHIDHTGLL PRMVRDGFTG PVYCTEPTRD LLEIMLQDSA NIQEMEAEWQ TRKQKRKGRK
PVDPLYTFAD AARVSRFFEN VEYNRPFSPV EGVTVTYKDA GHILGSAFLE IEVCEHGRCS
RLIFSGDLGK PNSLIVRDPE AAAAADYLFV ESTYGDRNHK DESNSRQELA EAIAYSYRQG
EKVIIPAFAV ERTQEVLYTL FLLQKEGRMP VDMPIFLDSP LAIRATEIFR KHPRFFDEEM
QKLLLSGEDP FAMPSLRLTT KTQESQAINN YTGPAVIISA SGMCNAGRIK HHLRHNIWRP
GASIVFVGYQ AVGTPGRRIV DGARSIRLFG EEIAIQAKVF TIGGFSGHAG QSQILDWVGK
FATKEMKVFL VHGEEKAQQA LKAILEEKYE LSVHSPGYLE EIELEPGEAV VTTGDPQRYQ
PQLNWDFLLS ETEARMMQLR ARKGDIEHAD WAQQVEIRDR LLELNNEMLG ILSEL
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