| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1714 |
|---|
| Symbol | |
|---|
| ID | 3756712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1771992 |
|---|
| End bp | 1773413 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637782594 |
|---|
| Product | heptosyltransferase family protein |
|---|
| Protein accession | YP_388206 |
|---|
| Protein GI | 78356757 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC CTCCCGTGCT GGTTATCCAG ATGCAGCGGC TGGGCGATCT TGTGCTCAGT
TTTCCTTTGC TGGGCTGGCT GAAAATGCGT TATCCGGACA CCCCGATCTG GGTTGTGGCC
GAGCCTGTTT TTTTCAAAGG TCTGATGACA CTGTCTCCGG AAGTAACGTA CTTCCCTCCG
GAAGCCGCCC CTGCACTGGC AAAAGAGTCT TATACGGCCG TTATCAACCT GAGCCACCGG
CCCGAAGCGG CAAAACTGGC CGGCGCGGCA CGGACTGAAG AGCTTTACGG CCTGTACCAG
TCGAACGGCG CCACACGCAT AAAGGGGGAC TGGCATCTGT ACCGTGCCGG TCTGACTCAC
AACAACAGGC ATAATGCATT CCACTGGGCC GACCTTAATG CACTTGACTG CATCGGGACA
TCCATGCTGC AAAAAACAGC CTGGCCCCCC ATGCGGTACG CCAGCGGCTC GGAAGGCCGC
ATAGGCCTTT TTCTTGGCGC CAGCGAACAA GATAAACATC CCGATGCTGT TTTCTGGGCG
GCCTTTGCGG AAAAACTGCT CGCAGCAGGA TTCAAGCCTG TACTCCTAGG CGGAAAAGCA
GAAATGCCGC TGGCGGCACG CACGGCAGCC ATCCTTAAAG CCCCCGCCCT GAACATGGCC
GGCCGTTTTT CGCTGCCTGA ATTTGTGGAA GTTCTGCGCT CGCTGCGGCT TCTTGTCACA
CCGGACACCG GTCCCATGCA TGTGGCGGCA TGGACAGGCA CACCCACGCT CAACCTTTCT
CTGGGACCTG TCTCTGCCTG GGAAACCGCC CCCTTTCCTC CGGGGCATTT TGTTCTGCAA
AGCACTCTCA GCTGTGTAGG CTGCTGGCGC TGTAAACACC CCCGCCCCTA CTGTCACGAC
CAGTTCAGTC CGGCACGCAT TGCATCGCTG GTACGCATGA TTCTGAGCCG CACCCCAACC
GCTCTTTCCA CCCTGCATCT GCCGGGCCAG CGTCTTCTGC AAAGCTCACG CAGTACCGCG
GGGCTTTTCC GGCTTGTTCC TCTTGATATT TCGGGAAAAA AACTGCAACC GGCATATGGC
AGGGACTTTC TGCGCCGGTT CTGGCAGGCT TATTTTTTTC ATACCCTTGC TGACGGCAAA
AGCGAAAGTC TGCATACCGC CTTCAGCGCA CTGGCAACCG CCATGCCGGC AATTGCAGAG
CGGCTGCCCG CCGCATCCCT GCAACTCAGC CGTATCCTTT CACTGGGGCT GCGCAAAGGG
CATCATGCCT TGGGCGACAG TTTCTGGCTG CAGTTTCCTC CTTTTCTGCG TCCGCTCACA
GGCTATCTGC AGCAAGCTCT TAGTAATGAA GACTACAGCC GCCCGGCCTA CGCGCATGCT
CTCAAGCTGG TGGAAACCCT CTTCGCGGCA TTGCCGCGAT AG
|
|---|
| Protein sequence | MKNPPVLVIQ MQRLGDLVLS FPLLGWLKMR YPDTPIWVVA EPVFFKGLMT LSPEVTYFPP
EAAPALAKES YTAVINLSHR PEAAKLAGAA RTEELYGLYQ SNGATRIKGD WHLYRAGLTH
NNRHNAFHWA DLNALDCIGT SMLQKTAWPP MRYASGSEGR IGLFLGASEQ DKHPDAVFWA
AFAEKLLAAG FKPVLLGGKA EMPLAARTAA ILKAPALNMA GRFSLPEFVE VLRSLRLLVT
PDTGPMHVAA WTGTPTLNLS LGPVSAWETA PFPPGHFVLQ STLSCVGCWR CKHPRPYCHD
QFSPARIASL VRMILSRTPT ALSTLHLPGQ RLLQSSRSTA GLFRLVPLDI SGKKLQPAYG
RDFLRRFWQA YFFHTLADGK SESLHTAFSA LATAMPAIAE RLPAASLQLS RILSLGLRKG
HHALGDSFWL QFPPFLRPLT GYLQQALSNE DYSRPAYAHA LKLVETLFAA LPR
|
|---|
| |