Gene Dde_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1709 
Symbol 
ID3756707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1765861 
End bp1766754 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content56% 
IMG OID637782589 
Productflagellin 
Protein accessionYP_388201 
Protein GI78356752 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00621943 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTGG TCATAAATCA CAACATGATG GCTATGAACG CCACCCGTAA CCTCTCAGAA 
AGTTACGGGC GCCTTGCCAC TTCAACCCGC AGGCTTTCTT CGGGGCTCAG AGTCGGCACT
GCGGCGGATG ACGCTGCAGG TCTTGCCATC CGCGAATTGA TGCGCGCAGA TATTTCCACC
ATGCAACAGG GCATCAGAAA CGCCAACGAT GCCATCTCGA TGATCCAGAC AGCTGATGGT
GCGCTGCAGG TCATCGACGA AAAGCTCATC CGCATGAAAG AGCTTGCCGA ACAGGCCGCA
ACGGGTACTT ACAACTCTGA CCAGCGTCTG ATGATCGAAT CGGAATATCA GGCAATGGCA
TCTGAAATCA CCCGTATTGC CATGGCCACG GACTTCAACG GCATACACCT GCTCAACGGC
ACGCTTTCCG GCACCCACGA CGGTACCGGC CTGCAGCAGA CCGGCGCCAT GAAGATTCAC
TTCGGCACCG GCAACGACTC CAGCGAAGAC TACTATTACA TCAAAATTGC CGGGTCCACA
GCATCCATGC TCGGCATAGG CAACCAGGCC GACCCCAGAG TGGCAGGCGG TTACACCATT
TCCACCCAGT CCGCCGCGCA GGGTGCACTG ACCGCCATCG ATCAGGCGAT TATTTCCAAG
GACAAAATCA GAGCGTCTCT GGGCGCGCTG CAAAACAGGC TGGAAAACAC CATCACCAAC
CTGAGCATCC AGTCCGAAAA CCTTCAGGCT TCCGAATCGC GTATTTCGGA CGTCGATGTG
GCCACTGAAA TGACGGAATT CACGCGTAAC CAGATTCTTA CGCAGTCGGC TGTCGCCATG
CTGACGCAGG CTAACTCGCT GCCTCAGATG GCCATGCAGC TCATCGGCGG CTAG
 
Protein sequence
MSLVINHNMM AMNATRNLSE SYGRLATSTR RLSSGLRVGT AADDAAGLAI RELMRADIST 
MQQGIRNAND AISMIQTADG ALQVIDEKLI RMKELAEQAA TGTYNSDQRL MIESEYQAMA
SEITRIAMAT DFNGIHLLNG TLSGTHDGTG LQQTGAMKIH FGTGNDSSED YYYIKIAGST
ASMLGIGNQA DPRVAGGYTI STQSAAQGAL TAIDQAIISK DKIRASLGAL QNRLENTITN
LSIQSENLQA SESRISDVDV ATEMTEFTRN QILTQSAVAM LTQANSLPQM AMQLIGG