Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1580 |
Symbol | |
ID | 3755982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1605314 |
End bp | 1606105 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637782458 |
Product | TPR domain-containing protein |
Protein accession | YP_388072 |
Protein GI | 78356623 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0635876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGTTC GGCAGAGTAT GGCATTGGCA TTATGTGTGG TGGCAGCGAC GGTACTGGCT GGCTGTGCTC CGCGCGGCGG AGATACCGTT GCCGCCAGCA GTGAATGGCG GCTGCAGAAT CTGGAAGCGA ATCAGCTTGA AATGCAGGAA AAAGACCGCG CTGCCGGTGC CGAAATGCGC AGCAGGCTTC AGGCGCTGGA AAACAGACTG GAACGTCTGG AAAAGAAGCT GGAAGATACC GGCAGCATGA ATGCCGCTGC ACAGGCGGAT GCTGAAGCCC GTAAAGCCGC GGAGAATGCG AAGCAGTACG CCTCAACGGC ACCTGCACCT GCGCCTGCTC CTGTTGCCGC GCCGCAGCAG AGTCCGGTAC AGGCCGCAGG GCATGCAGCC TCTGCAAAGA AGGCCCCTGC TTCACAGCCG GCTGATGAGA CGGCTCGCTA TCAGGCCGGT GTAAAAGCGG TGATGAATGA AGATGTGAAG ACCGGCCGCA GCATTCTGGA AGCTTTTCTG GCTGATTTTC CCAAAAGCGG CCTTGCCCCC AACGCGTCCT ACTGGCTTGG TGAAACCTAT TACCACGAAA AGCGTTACGC CGAAGCCATT CTTACCTTTA AAGAGGTGGT ACGCAATTAT CCCAAGCACG AGAAAGCCGC CGCAGCCATG TTGAAAACAG GCTATGCGTA CGAAATGCTG GGCGATAAAA GCAATGCCCG TTTTTATCTG CAGACCCTTG TGGATGAATA TTCCGCTTCA GAACCTGCTG CCCTTGCGCG CAAGCGTTTG AAATCGCTGT AA
|
Protein sequence | MNVRQSMALA LCVVAATVLA GCAPRGGDTV AASSEWRLQN LEANQLEMQE KDRAAGAEMR SRLQALENRL ERLEKKLEDT GSMNAAAQAD AEARKAAENA KQYASTAPAP APAPVAAPQQ SPVQAAGHAA SAKKAPASQP ADETARYQAG VKAVMNEDVK TGRSILEAFL ADFPKSGLAP NASYWLGETY YHEKRYAEAI LTFKEVVRNY PKHEKAAAAM LKTGYAYEML GDKSNARFYL QTLVDEYSAS EPAALARKRL KSL
|
| |