| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1571 |
|---|
| Symbol | |
|---|
| ID | 3755973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1594903 |
|---|
| End bp | 1596012 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637782449 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_388063 |
|---|
| Protein GI | 78356614 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.421164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAAAAG TCGTCGTTGT TGATGATTCC GCCTTTATGC GCAAGGCTCT CAGCAGCATG
CTGGAGAAAG ACCCCGGTAT TTCCGTGGTT GCCACGGCAC GCAACGGTGA AGAAGGGCTG
GAGCAGATAC GTAAACATGA CCCTGATGTG GTCACGCTTG ATATTGAAAT GCCCCGCATG
GACGGGTTGA CGGCACTGCG CCATATAATG ATGGAAATGC CCCGCCCGGT GCTCATGGTC
AGCTCGCTGA CCGTGGAAGG GGCGGAAGCG ACCCTGAAGG CGATGGAGCT GGGCGCTGTT
GATTTTATTC CCAAACAGCT TTCCACTGTG TCGCTCGATA TCGTTAAAAT TGAAAAAGAC
CTGCAGGAAA AGGTAAAGGC CATTTCCCGT CGCAGGGTTC CGGGCCGGTC TTTCCGTCCT
GCCCCCGCGG TCCGTCCTGC TGCCCCTGCC GCTCTGCGTG CCACGCCGCG GCCTTCCGCT
GCTCCCTCAT CCGCTGCTTC TTCAACGGGA ACGCTGCAGG TTGCCGGTGG CAAGCCGGTG
CGCGATGTGG TGGCCATCGG GGTGTCCACA GGGGGACCTC CGGCTGTGCA GAAAGTGCTT
TCACGTCTGC CGCAGGATTT TCCCGTGGGT ATTGTCATTG CTCAGCACAT GCCCGCTGCG
TTTACCGGGC CGTTTGCCAA AAGGCTTGAC GGGGTGTGCG CCATTGCCGT CAAAGAAGCC
GAAGACGGCG AGATGCTGAT GCCGGGCAAG GCCTACATTG CGCCCGGCGG CAAACATGTG
CGGGTCAGAA ACACCCGCGG CCGCCTGACT CTGGAAGTGT CTGCCGAACC GGCAGAGGCG
CTTTACAAGC CTTCCGCCAA TGAGCTTATG GAATCTGCCG GTCTTGCTCT CGGGCGACGT
TCGCTCGGTG TCATTCTTAC CGGTATGGGC AGTGACGGGC TGGAGGGCAT CAAGGTGCTC
AAGCAGAAAG GTGGGCATGC TCTGGCGCAG AGTGACTCCA CCTGCGTTGT GTACGGTATG
CCCAAAGCGA TTGTCGACGC CGGTCTGGCT GACAGTGTCG TCGATATTGA CGATATGGCG
CAGGCCATTA TGAATGCTGT TTATAAGTGA
|
|---|
| Protein sequence | MIKVVVVDDS AFMRKALSSM LEKDPGISVV ATARNGEEGL EQIRKHDPDV VTLDIEMPRM
DGLTALRHIM MEMPRPVLMV SSLTVEGAEA TLKAMELGAV DFIPKQLSTV SLDIVKIEKD
LQEKVKAISR RRVPGRSFRP APAVRPAAPA ALRATPRPSA APSSAASSTG TLQVAGGKPV
RDVVAIGVST GGPPAVQKVL SRLPQDFPVG IVIAQHMPAA FTGPFAKRLD GVCAIAVKEA
EDGEMLMPGK AYIAPGGKHV RVRNTRGRLT LEVSAEPAEA LYKPSANELM ESAGLALGRR
SLGVILTGMG SDGLEGIKVL KQKGGHALAQ SDSTCVVYGM PKAIVDAGLA DSVVDIDDMA
QAIMNAVYK
|
|---|
| |