Gene Dde_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1551 
Symbol 
ID3755990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1569842 
End bp1570600 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID637782428 
ProductD-alanyl-D-alanine dipeptidase 
Protein accessionYP_388043 
Protein GI78356594 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.03946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAATC ACTACAGCGC CCCCATTCCC GCTGTACGTT CCCACAGCTG GGAAGAAGTC 
TACTCCGTGT CCATTGCCGA AAATAATGAA CCGCTGGTTC CGCTGTCGCT GGTTCCGGAG
AAGATATTGG TGCGTTCGGC CTATTTTGCC GCCGGTATAG GCGGAGCCTT GCCGGAATGT
TATGCCCGCC GGAGTGTGTT TGAAAAATTA TTGCTGGCGG CCGAAATGTT GCCGCCTGAT
CTGCGTATGG TGGTGCTGGA CGGATGGCGC AGCCCGCAGG TCCAGACTGT GCTGTTCCAG
CGCTGCCGCA GTGCTTTGGC CAGAGCCAAC CCGCAGGCGG ATGAAGATGA ACTGCACGCG
CTGACCCAGC AGTATGTGGC ACGCCCCGGC TTTGACGCTT CCGCGCCGTC GCCGCATGTG
ACAGGAGGGG CAGTTGACCT TACTCTGGCA ACCCGTTCCG GCAGGCAGCT GTTTTTCGGT
TCGCCCTTTG ATTATCCCAG AGACATCTCA TACACGCGGC ATCTGGAAGA ACGTCTTGAG
CGGGGCATCG CATTGCAGCC TGAGGAAAAA GAGGCCTTGA GCAACCGCCG GCTGCTGTAC
GGCGTGATGG TCCGGGCCGG ATTTGTCAAT TATTCCTGTG AATGGTGGCA CTTCGAGTAC
GGCACCCAGC GCTGGGCATT GAAAAAAGGT GAAGATTTTG CCGTGTACGG ACCTTCGCGG
GTATGTCTGA ATCCTTTTGA ATCGTTTGAA AAAAAATGA
 
Protein sequence
MYNHYSAPIP AVRSHSWEEV YSVSIAENNE PLVPLSLVPE KILVRSAYFA AGIGGALPEC 
YARRSVFEKL LLAAEMLPPD LRMVVLDGWR SPQVQTVLFQ RCRSALARAN PQADEDELHA
LTQQYVARPG FDASAPSPHV TGGAVDLTLA TRSGRQLFFG SPFDYPRDIS YTRHLEERLE
RGIALQPEEK EALSNRRLLY GVMVRAGFVN YSCEWWHFEY GTQRWALKKG EDFAVYGPSR
VCLNPFESFE KK