Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1549 |
Symbol | |
ID | 3755988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1567982 |
End bp | 1568506 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637782426 |
Product | TRAP-type C4-dicarboxylate transport system small permease component-like |
Protein accession | YP_388041 |
Protein GI | 78356592 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.170274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCCGTG TGGCGGACGT CTGTCATAAG GCTTCCGACC TGCTGGAGCG CCTCTGCCTT ATGGGGGCGG GGGCTCTCCT CGTGGTCAAC CTGCTGTCGG TTATGCTTGG TGTGTTTTCC CGTTTTTACC GTGCGCCCGT GTGGACAACT GATCTGGCAA AGGTCACGCT TGTCTGGATG GTCATGCTGG CTGCTGCTCC TGCTTTGAAG CGCGGCGAGC ACATGGCCAT TCACATTCTG GTCGACAGGC TGTCTCCCGG CGCCAGAAGG GCGGCTGTGA TATTCCGTAC ACTGGTGTTT GCGGGCATCC TTGTGCTTAT GATCTGGCTG GGCGGTGCAT ATGCTTACAA AATGCGTCTG TTCACCATTA TGACGCTGGG AGTGAAAAAA ACGATACCGT TGCTGGCGGT ACCCGTAGGC ATGGCGCTGA TGCTTGCAGA ATACGCATTG CAGCAGTTCA TCGCACTTGA TGCGCTGGCC GCCCGCCCCG TGCGCGGTGC ATCAGAGGGG GAAGACGCGT CATGA
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Protein sequence | MGRVADVCHK ASDLLERLCL MGAGALLVVN LLSVMLGVFS RFYRAPVWTT DLAKVTLVWM VMLAAAPALK RGEHMAIHIL VDRLSPGARR AAVIFRTLVF AGILVLMIWL GGAYAYKMRL FTIMTLGVKK TIPLLAVPVG MALMLAEYAL QQFIALDALA ARPVRGASEG EDAS
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