| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1419 |
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| Symbol | |
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| ID | 3756128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1441886 |
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| End bp | 1443226 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637782297 |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_387913 |
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| Protein GI | 78356464 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAC GCGGAACTGA CGGGTACCGT CTTGAAGATA TCGAATATAT GAGCGAGGTT
GATGCCGCCC TGCGTCGCAG GGGGCACCCC TTTGCCTTTA TGCTTTCAGC CAGCGTGGCC
TTGTTGTTCG GCGTGCTGGT TATCTGGGCG CATTTTGCCG TGCTGGATGA AGTGACCAGA
GGGCTGGGAC AGGTCATCCC GTCGCAGCGC GTGCAGGAAA TCCAGAACCT TGAAGGGGGC
ATTCTGCAGG AGATCGCCGT TTCGGAAGGG CAGATTGTGG AAAAAGGCGA TATTCTTGTA
CGCATTGACA ATGAAGCCGC GGCCAGTTTT TACCGCGACG CCTATTCAAA GTCACTGGAG
CACAAAGCCG CCATAGCCAG ACTGGAGGCT GAACTGGAAG GCTGGCGCGA GATTGTTTTT
CCCGAAGATG TCATGCAGAG CGCCCCGCTG GTTATACAGG GGCAGGCTTC CATTGCTGCG
GCAAAACGGC AGCAGCAGCA GGTGGAACTG CGCGTGCTGG AAAACCAGCG CGAACAGAAA
ATAAAAGAAG TGCAGGAAAT GGTACAGCGC AGGCAGAATC TGGAAAGCAG CCTGCGTGTG
GCCATGGAAC AGCGTGACAT TGCCCGTCCG CTGATGGAAA AAAAGGTATA CCCGCGTGTG
GATTACCTGA CTCTTGAGCA GAAGGTCATT TCACTGCGCG GAGAAATAGA TTCGCTGGCA
CTGAATATAC CGCGTGCACG GTTTGCGGCT GAAGAAGCGC GGGAACGTAT ACGGCAGCGC
GAAGCGGAAT ATCGCAGCGA GGCGCTGGAA GAGATGAACA GACGTCAGGT TGAACTGCGC
TCGTTGCAGG AAACCCTGTC CGCAGGCGGC GACAGAGTCA CCCGTACCGA TGTGCGTTCT
CCTGTGCGCG GTACCGTGAA AAAAATCAAT ATCAACACCA TCGGCGGGGT GGTGAAGCCC
GGTGAATCAA TCATGCAGAT TGTTCCGCTG GACGATACTC TGCTGATAGA AGCCCGCATC
AGGCCGCAGG ATATCGCCTT TCTGCATCCC GGGCAGAAAG CCACTGTAAA GATAACTGCA
TATGATTTTT CGGTGTATGG CGGTCTGGAA GGCAAGGTGG AGCAGATAAG CGCCGATACC
ATTCAGGATA ATGATGGCAA CAGTTTTTAT CTGGTCAAGC TGCGTACCAG AGCAAGCGCC
ATACAGTACA GGGGCGAGCA GTTGCCCATT ATTCCGGGCA TGATGGCCAC GGTGGATATT
CTTACGGGCA AAAAGACCGT GCTCGATTAC CTGCTTAAGC CCATTCTGAA GGCCAGACAG
AACGCGCTCA GGGAGCGTTG A
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| Protein sequence | MNRRGTDGYR LEDIEYMSEV DAALRRRGHP FAFMLSASVA LLFGVLVIWA HFAVLDEVTR
GLGQVIPSQR VQEIQNLEGG ILQEIAVSEG QIVEKGDILV RIDNEAAASF YRDAYSKSLE
HKAAIARLEA ELEGWREIVF PEDVMQSAPL VIQGQASIAA AKRQQQQVEL RVLENQREQK
IKEVQEMVQR RQNLESSLRV AMEQRDIARP LMEKKVYPRV DYLTLEQKVI SLRGEIDSLA
LNIPRARFAA EEARERIRQR EAEYRSEALE EMNRRQVELR SLQETLSAGG DRVTRTDVRS
PVRGTVKKIN INTIGGVVKP GESIMQIVPL DDTLLIEARI RPQDIAFLHP GQKATVKITA
YDFSVYGGLE GKVEQISADT IQDNDGNSFY LVKLRTRASA IQYRGEQLPI IPGMMATVDI
LTGKKTVLDY LLKPILKARQ NALRER
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